RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 AP4B1Q9Y6B7 739 aa14.04□□□□□ -0.16
TRIM4-203ENST00000355947 ADAMTSL1Q8N6G6 1762 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 CAPN14A8MX76 684 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 F8W8V4 182 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 METTL18O95568 372 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 AVPR1AP37288 418 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 ART3Q13508 389 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 CA9Q16790 459 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 B3GNT9Q6UX72 402 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 CYP2R1Q6VVX0 501 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 LRRC43Q8N309 656 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 LARGE2Q8N3Y3 721 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 SPATA6LQ8N4H0 392 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 C12orf29Q8N999 325 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 CLEC4DQ8WXI8 215 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 EME1Q96AY2 570 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 PEBP4Q96S96 227 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 CCDC106Q9BWC9 280 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 TRPV6Q9H1D0 765 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 RPAP3Q9H6T3 665 aaPredicted RBP14.03□□□□□ -0.16
TRIM4-203ENST00000355947 C17orf75Q9HAS0 396 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 ZNF70Q9UC06 446 aaPredicted RBP14.03□□□□□ -0.16
TRIM4-203ENST00000355947 HERC5Q9UII4 1024 aaKnown RBP14.03□□□□□ -0.16
TRIM4-203ENST00000355947 PSAT1Q9Y617 370 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 TEX264Q9Y6I9 313 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 H3BSA7 217 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 TGDSO95455 350 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 RALBP11234 206 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 RPL10P27635 214 aaKnown RBP14.03□□□□□ -0.16
TRIM4-203ENST00000355947 CRABP2P29373 138 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 NUMBP49757 651 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 GBE1Q04446 702 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 ANKRD20A4Q4UJ75 823 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 SH2D4BQ5SQS7 431 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 KRT80Q6KB66 452 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 DNAAF3Q8N9W5 541 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 FBXL18Q96ME1 805 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 NUF2Q9BZD4 464 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 DOLKQ9UPQ8 538 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 APOL1O14791 398 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 CXCL8P10145 99 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 MGAT1P26572 445 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 HOXA10P31260 410 aaPredicted RBP14.03□□□□□ -0.16
TRIM4-203ENST00000355947 SLC25A11Q02978 314 aaKnown RBP14.03□□□□□ -0.16
TRIM4-203ENST00000355947 DBN1Q16643 649 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 SCUBE3Q8IX30 993 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 ADGRF2Q8IZF7 708 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 FAM149B1Q96BN6 582 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 LENG8Q96PV6 779 aaPredicted RBP14.03□□□□□ -0.16
TRIM4-203ENST00000355947 TWNKQ96RR1 684 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 CCT7Q99832 543 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 RSAD1Q9HA92 442 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 ASNSD1Q9NWL6 643 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 PAK5Q9P286 719 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 SSX2IPQ9Y2D8 614 aa14.03□□□□□ -0.16
TRIM4-203ENST00000355947 LAMB2P55268 1798 aa14.02□□□□□ -0.16
TRIM4-203ENST00000355947 DESP17661 470 aa14.02□□□□□ -0.16
TRIM4-203ENST00000355947 CCND2P30279 289 aa14.02□□□□□ -0.16
TRIM4-203ENST00000355947 FDFT1P37268 417 aa14.02□□□□□ -0.16
TRIM4-203ENST00000355947 ADARP55265 1226 aaKnown RBP14.02□□□□□ -0.16
TRIM4-203ENST00000355947 YWHAEP62258 255 aaKnown RBP14.02□□□□□ -0.16
TRIM4-203ENST00000355947 SLC18A2Q05940 514 aa14.02□□□□□ -0.16
TRIM4-203ENST00000355947 TFDP2Q14188 446 aa14.02□□□□□ -0.16
TRIM4-203ENST00000355947 KLHDC10Q6PID8 442 aa14.02□□□□□ -0.16
TRIM4-203ENST00000355947 SAMD3Q8N6K7 520 aa14.02□□□□□ -0.16
TRIM4-203ENST00000355947 PCDH20Q8N6Y1 951 aaKnown RBP14.02□□□□□ -0.16
TRIM4-203ENST00000355947 BHLHE22Q8NFJ8 381 aaPredicted RBP14.02□□□□□ -0.16
TRIM4-203ENST00000355947 TMEM216Q9P0N5 145 aa14.02□□□□□ -0.16
TRIM4-203ENST00000355947 TAF1LQ8IZX4 1826 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 ATAD5Q96QE3 1844 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 KLHL2O95198 593 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 RARS2Q5T160 578 aaKnown RBP14.02□□□□□ -0.17
TRIM4-203ENST00000355947 TSHZ1Q6ZSZ6 1077 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 CMTM5Q96DZ9 223 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 B3GNT5Q9BYG0 378 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 Q9H521 79 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 ZNF302Q9NR11 478 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 ARHGAP26Q9UNA1 814 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 MFHAS1Q9Y4C4 1052 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 NHSQ6T4R5 1651 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 C10orf71Q711Q0 1435 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 BUD23O43709 281 aaKnown RBP14.02□□□□□ -0.17
TRIM4-203ENST00000355947 ITGB3P05106 788 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 DHRS4L1P0CG22 281 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 LSAMPQ13449 338 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 MYBPC3Q14896 1274 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 TMC7Q7Z402 723 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 KDELC2Q7Z4H8 507 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 TMEM192Q8IY95 271 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRIM4-203ENST00000355947 ZNF781Q8N8C0 355 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 C7orf26Q96N11 449 aa14.02□□□□□ -0.17
TRIM4-203ENST00000355947 ZNF277Q9NRM2 450 aaPredicted RBP14.02□□□□□ -0.17
TRIM4-203ENST00000355947 B4GALT5O43286 388 aa14.01□□□□□ -0.17
TRIM4-203ENST00000355947 TFPTP0C1Z6 253 aa14.01□□□□□ -0.17
TRIM4-203ENST00000355947 COX4I1P13073 169 aa14.01□□□□□ -0.17
TRIM4-203ENST00000355947 ITGAXP20702 1163 aa14.01□□□□□ -0.17
TRIM4-203ENST00000355947 IDH3AP50213 366 aa14.01□□□□□ -0.17
TRIM4-203ENST00000355947 CDH15P55291 814 aa14.01□□□□□ -0.17
TRIM4-203ENST00000355947 PPIDQ08752 370 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms