RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CYTH4Q9UIA0 394 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 NFASCO94856 1347 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 PGK2P07205 417 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 CXCL8P10145 99 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 GPX6P59796 221 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 SLC25A3Q00325 362 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 MMRN1Q13201 1228 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 FAXCQ5TGI0 409 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 CATSPERGQ6ZRH7 1159 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 UNC45BQ8IWX7 931 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 ULK2Q8IYT8 1036 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 GPC2Q8N158 579 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 CCDC33Q8N5R6 958 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 KCTD6Q8NC69 237 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 FBXO36Q8NEA4 188 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 TSSK1BQ9BXA7 367 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 MRPL4Q9BYD3 311 aaKnown RBP9.69□□□□□ -0.86
SMG6-202ENST00000354901 HMGXB4Q9UGU5 601 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 ZNF112Q9UJU3 913 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 COL11A1P12107 1806 aaPredicted RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 NOP56O00567 594 aaKnown RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 TOM1L1O75674 476 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 TCEA3O75764 348 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 UQCRBP14927 111 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 FOLH1Q04609 750 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 SULT2A1Q06520 285 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 KRT81Q14533 505 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 OASLQ15646 514 aaKnown RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 SMUG1Q53HV7 270 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 TREML2Q5T2D2 321 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 SH3PXD2AQ5TCZ1 1133 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 FASTKD5Q7L8L6 764 aaKnown RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 TRIML2Q8N7C3 387 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 UBA3Q8TBC4 463 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 PPP4R1Q8TF05 950 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 CPXM1Q96SM3 734 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 HEPHQ9BQS7 1158 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 UTP6Q9NYH9 597 aaKnown RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 SLC7A8Q9UHI5 535 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 MAD1L1Q9Y6D9 718 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 ADGRA2Q96PE1 1338 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 A0A1B0GTW7 788 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 NDC80O14777 642 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 LRCH4O75427 683 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 S100BP04271 92 aaPredicted RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 OCM2P0CE71 109 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 OCMP0CE72 109 aaPredicted RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 PORP16435 677 aaPredicted RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 RPL22P35268 128 aaKnown RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 RPL5P46777 297 aaKnown RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 CLCN3P51790 818 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 IRX4P78413 519 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 LAMTOR4Q0VGL1 99 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 PEX6Q13608 980 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 PIGHQ14442 188 aaPredicted RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 MORF4L2Q15014 288 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 PDK4Q16654 411 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 HSDL1Q3SXM5 330 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 FBXL19Q6PCT2 694 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 PRPF39Q86UA1 669 aaKnown RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 METTL25Q8N6Q8 603 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 ARFGAP1Q8N6T3 406 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 GABPB2Q8TAK5 448 aaPredicted RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 PAFAH2Q99487 392 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 SPON1Q9HCB6 807 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 GGA3Q9NZ52 723 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 SLC17A7Q9P2U7 560 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 CLUHO75153 1309 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 A8MU76 341 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 SPECC1L-ADORA2AF8WAN1 911 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 C2CD2LO14523 706 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 OGTO15294 1046 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 MSCO60682 206 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 AVILO75366 819 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 TMEM63AO94886 807 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 FARP2O94887 1054 aaPredicted RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 RBP3P10745 1247 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 SLC5A2P31639 672 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 ARL4CP56559 192 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 YWHAGP61981 247 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMG6-202ENST00000354901 PDE1BQ01064 536 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 SMAD1Q15797 465 aaKnown RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 CNGA3Q16281 694 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 SCYL2Q6P3W7 929 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 DHDDSQ86SQ9 333 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 WDR49Q8IV35 697 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 CPNE9Q8IYJ1 553 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 TRPM4Q8TD43 1214 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 CPT1BQ92523 772 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 COPS5Q92905 334 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 TTC25Q96NG3 672 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 HOXC10Q9NYD6 342 aa9.68□□□□□ -0.86
SMG6-202ENST00000354901 PSMC3IPQ9P2W1 217 aaPredicted RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 HBS1LQ9Y450 684 aaKnown RBP9.68□□□□□ -0.86
SMG6-202ENST00000354901 F5H423 210 aaPredicted RBP9.67□□□□□ -0.86
SMG6-202ENST00000354901 TNNC2P02585 160 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 BGNP21810 368 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 RCVRNP35243 200 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 ZNF132P52740 706 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 EMP3P54852 163 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms