RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ITIH5Q86UX2 942 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 PYROXD2Q8N2H3 581 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 KREMEN2Q8NCW0 462 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 CCDC26Q8TAB7 109 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 C1orf54Q8WWF1 131 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 PSMG2Q969U7 264 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 RNF157Q96PX1 679 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 MAGEB5Q9BZ81 275 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 ANLNQ9NQW6 1124 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.19■□□□□ 0.18
CTSA-202ENST00000354880 AMACRQ9UHK6 382 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 R3HDM2Q9Y2K5 976 aaKnown RBP16.19■□□□□ 0.18
CTSA-202ENST00000354880 TARSL2A2RTX5 802 aaKnown RBP16.19■□□□□ 0.18
CTSA-202ENST00000354880 DYNC1I1O14576 645 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 MSI1O43347 362 aaKnown RBP16.19■□□□□ 0.18
CTSA-202ENST00000354880 TLR5O60602 858 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 CCR1P32246 355 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 IRS1P35568 1242 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 FNTAP49354 379 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 EFEMP1Q12805 493 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 GPM6BQ13491 265 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 TFDP2Q14188 446 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 CCNG2Q16589 344 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 ANKRD20A8PQ5CZ79 823 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 BRMS1LQ5PSV4 323 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 C10orf120Q5SQS8 335 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 CCDC137Q6PK04 289 aaKnown RBP16.19■□□□□ 0.18
CTSA-202ENST00000354880 MAATS1Q7Z4T9 603 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 ZNF276Q8N554 614 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 HDAC7Q8WUI4 952 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 ATG4AQ8WYN0 398 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 FAF2Q96CS3 445 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 RUNDC3BQ96NL0 473 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 CDK5RAP1Q96SZ6 601 aaKnown RBP16.19■□□□□ 0.18
CTSA-202ENST00000354880 DCLK3Q9C098 648 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 UXTQ9UBK9 157 aaPredicted RBP16.19■□□□□ 0.18
CTSA-202ENST00000354880 PCYOX1Q9UHG3 505 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 TLR6Q9Y2C9 796 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 ASB3Q9Y575 518 aa16.19■□□□□ 0.18
CTSA-202ENST00000354880 H0YGN5 161 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 I6L893 689 aaPredicted RBP16.18■□□□□ 0.18
CTSA-202ENST00000354880 TBX18O95935 607 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 LRG1P02750 347 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 C8AP07357 584 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 COILP38432 576 aaPredicted RBP16.18■□□□□ 0.18
CTSA-202ENST00000354880 ARL4AP40617 200 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 CLCN4P51793 760 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 DYNLT1P63172 113 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 PDE12Q6L8Q7 609 aaKnown RBP16.18■□□□□ 0.18
CTSA-202ENST00000354880 TADA2BQ86TJ2 420 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.18■□□□□ 0.18
CTSA-202ENST00000354880 CCSER2Q9H7U1 834 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 ARHGEF38Q9NXL2 777 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 TRPM5Q9NZQ8 1165 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 RCOR3Q9P2K3 495 aaPredicted RBP16.18■□□□□ 0.18
CTSA-202ENST00000354880 DMGDHQ9UI17 866 aaKnown RBP16.18■□□□□ 0.18
CTSA-202ENST00000354880 MSRAQ9UJ68 235 aa16.18■□□□□ 0.18
CTSA-202ENST00000354880 MTCL1Q9Y4B5 1905 aaKnown RBP16.18■□□□□ 0.18
CTSA-202ENST00000354880 ZNF840PA6NDX5 716 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 APOC4-APOC2K7ER74 178 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 APOC2P02655 101 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 PPP3CCP48454 512 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 SLC7A5Q01650 507 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 NNTQ13423 1086 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 SNX1Q13596 522 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 DHX34Q14147 1143 aaKnown RBP16.17■□□□□ 0.18
CTSA-202ENST00000354880 PPP2R5DQ14738 602 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 RAB30Q15771 203 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 TTC27Q6P3X3 843 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 CCDC105Q8IYK2 499 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 TTC13Q8NBP0 860 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 PCDH19Q8TAB3 1148 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 HAUS1Q96CS2 278 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 CSPG4P5Q96PW8 444 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 PARD6BQ9BYG5 372 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 CWC15Q9P013 229 aaKnown RBP16.17■□□□□ 0.18
CTSA-202ENST00000354880 MARCH2Q9P0N8 246 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 STIM2Q9P246 746 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 CREB3O43889 395 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 C1RP00736 705 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 GOT1P17174 413 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 KCNJ1P48048 391 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 DR1Q01658 176 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 PPP2R2DQ66LE6 453 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 MIB1Q86YT6 1006 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 SLC39A13Q96H72 371 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 PNKPQ96T60 521 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 FAM118BQ9BPY3 351 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 NKX2-4Q9H2Z4 354 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 PLEKHA4Q9H4M7 779 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 CERS4Q9HA82 394 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 RASAL2Q9UJF2 1139 aa16.17■□□□□ 0.18
CTSA-202ENST00000354880 H3BRJ5 948 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 TTI1O43156 1089 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 HEXIM1O94992 359 aaKnown RBP16.16■□□□□ 0.18
CTSA-202ENST00000354880 TUBBP07437 444 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 SLC2A3P11169 496 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 ATP5C1P36542 298 aaKnown RBP16.16■□□□□ 0.18
CTSA-202ENST00000354880 TBX4P57082 545 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 SEMA3BQ13214 749 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms