RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 KLF6Q99612 283 aaPredicted RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 RBBP8Q99708 897 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 PAK5Q9P286 719 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 ITGA6P23229 1130 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 AKAP5P24588 427 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 MSLNQ13421 630 aaPredicted RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 C1DQ13901 141 aaKnown RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 TAF5Q15542 800 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 TRIP4Q15650 581 aaPredicted RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 ALX1Q15699 326 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 SHQ1Q6PI26 577 aaKnown RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 PALB2Q86YC2 1186 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 CIDECQ96AQ7 238 aaPredicted RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 GOLPH3Q9H4A6 298 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 FARSBQ9NSD9 589 aaKnown RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 CHKBQ9Y259 395 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 QRICH2Q9H0J4 1663 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 A0A1B0GVG6 124 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 ISPDA4D126 451 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 ZBTB39O15060 712 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 HOXB6P17509 224 aaKnown RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 TGM2P21980 687 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 PEX2P28328 305 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 MAPK12P53778 367 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 KCNK10P57789 538 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 ABATP80404 500 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 OR52E8Q6IFG1 317 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 TMEM214Q6NUQ4 689 aaKnown RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 EFL1Q7Z2Z2 1120 aaKnown RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 PTCD3Q96EY7 689 aaKnown RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 ZNF285Q96NJ3 590 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 NACC1Q96RE7 527 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 SSU72Q9NP77 194 aaKnown RBP5.17□□□□□ -1.58
SKP1-202ENST00000353411 PNPLA8Q9NP80 782 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 ARL8BQ9NVJ2 186 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 ASNSD1Q9NWL6 643 aa5.17□□□□□ -1.58
SKP1-202ENST00000353411 CLPXO76031 633 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PRKAR1AP10644 381 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ADRA1DP25100 572 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 GRIK1P39086 918 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ECT2LQ008S8 904 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 FAM98BQ52LJ0 330 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 WDR59Q6PJI9 974 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SLC2A7Q6PXP3 512 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ZDHHC13Q8IUH4 622 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RBM15BQ8NDT2 890 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 TMIEQ8NEW7 156 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RP9Q8TA86 221 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 TRUB1Q8WWH5 349 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 ZSCAN5AQ9BUG6 496 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 IFT52Q9Y366 437 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RNF17Q9BXT8 1623 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 OVOS2A0A0J9YW53 1432 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 OVOS2Q6IE36 1432 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 TNPO2O14787 897 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 TPST1O60507 370 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 OR7A10O76100 309 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 FAPQ12884 760 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PIGHQ14442 188 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 NCF4Q15080 339 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 MAPKAPK5Q8IW41 473 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 CYP4X1Q8N118 509 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 YTHDF1Q9BYJ9 559 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 TPK1Q9H3S4 243 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 WDR41Q9HAD4 459 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SRP68Q9UHB9 627 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 CDH22Q9UJ99 828 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 KMOO15229 486 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SLC22A1O15245 554 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 GZMAP12544 262 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 TSHRP16473 764 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 TFE3P19532 575 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 MSH3P20585 1137 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ENDOUP21128 410 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 FECHP22830 423 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RRM2P31350 389 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 GPSM2P81274 684 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SLC25A3Q00325 362 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ZNF568Q3ZCX4 644 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 FASTKD1Q53R41 847 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 MMAAQ8IVH4 418 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 EID3Q8N140 333 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 TTC16Q8NEE8 873 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 HAPLN3Q96S86 360 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PUS7LQ9H0K6 701 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 CD320Q9NPF0 282 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 IMPAD1Q9NX62 359 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PCSK1NQ9UHG2 260 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ABCG2Q9UNQ0 655 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 NPHP3-ACAD11A0A0J9YXS1 232 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 A0A0U1RQJ8 604 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RGSL1A5PLK6 1076 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 TNFRSF10AO00220 468 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SLC18A1P54219 525 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 EIF3EP60228 445 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 RHAGQ02094 409 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 BOLA3Q53S33 107 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 EIF3MQ7L2H7 374 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 FAM228AQ86W67 206 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RDM1Q8NG50 284 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms