RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 SLC4A5Q9BY07 1137 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 NSRP1Q9H0G5 558 aaKnown RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 A0A0G2JMZ2 1700 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 MBLAC1A4D2B0 266 aaPredicted RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 FAM47DPA6NHR8 397 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 MT-ND3P03897 115 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 ITGB1P05556 798 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 ATP2A2P16615 1042 aaKnown RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 FOXN2P32314 431 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 PHBP35232 272 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 CCNHP51946 323 aaPredicted RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 YWHAZP63104 245 aaKnown RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 B3GALT6Q96L58 329 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 KDM4CQ9H3R0 1056 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 TMEM30AQ9NV96 361 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 SHOC2Q9UQ13 582 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 SLC45A1Q9Y2W3 748 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 H0Y3Z8 333 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 TOP3BO95985 862 aaKnown RBP14.38□□□□□ -0.11
TRIM4-201ENST00000349062 PCK1P35558 622 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 GABRB2P47870 512 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 WDR4P57081 412 aaKnown RBP14.38□□□□□ -0.11
TRIM4-201ENST00000349062 FAAP100Q0VG06 881 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 TMEM110Q86TL2 294 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 NAT8LQ8N9F0 302 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 SCAMP5Q8TAC9 235 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 CSPG4P5Q96PW8 444 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 WDR83Q9BRX9 315 aaKnown RBP14.38□□□□□ -0.11
TRIM4-201ENST00000349062 KLC2Q9H0B6 622 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 VRTNQ9H8Y1 702 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 SLC17A7Q9P2U7 560 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 ANK1P16157 1881 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 FAM72CH0Y354 149 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 ALOX15BO15296 676 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 TRPA1O75762 1119 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 NPR3P17342 541 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 PTK7Q13308 1070 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 CRYMQ14894 314 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 TIGD5Q53EQ6 642 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 FAM72AQ5TYM5 149 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 FAM72DQ6L9T8 149 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 PID1Q7Z2X4 250 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 CROCCP2Q86T23 111 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 FAM72BQ86X60 149 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 USP6NLQ92738 828 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 ZNF317Q96PQ6 595 aaPredicted RBP14.38□□□□□ -0.11
TRIM4-201ENST00000349062 MTG1Q9BT17 334 aaPredicted RBP14.38□□□□□ -0.11
TRIM4-201ENST00000349062 IQCGQ9H095 443 aaKnown RBP14.38□□□□□ -0.11
TRIM4-201ENST00000349062 CRTAC1Q9NQ79 661 aa14.38□□□□□ -0.11
TRIM4-201ENST00000349062 GOLGA8TH3BQL2 631 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 MFSD11O43934 449 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 MGRN1O60291 552 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 GCAP28676 217 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 L1CAMP32004 1257 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 GEMIN4P57678 1058 aaKnown RBP14.37□□□□□ -0.11
TRIM4-201ENST00000349062 IL9RQ01113 521 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 TRMT10BQ6PF06 316 aaKnown RBP14.37□□□□□ -0.11
TRIM4-201ENST00000349062 VPS52Q8N1B4 723 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 LRRC8CQ8TDW0 803 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 PIGVQ9NUD9 493 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 PSMC3IPQ9P2W1 217 aaPredicted RBP14.37□□□□□ -0.11
TRIM4-201ENST00000349062 TCRBV9S1A1TA0A576 114 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 MGEA5O60502 916 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 PBX3P40426 434 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 SNX16P57768 344 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 STILQ15468 1287 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 ZNF449Q6P9G9 518 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 CLEC20AQ6ZU45 233 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 KCNN1Q92952 543 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 UBN1Q9NPG3 1134 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 GGA2Q9UJY4 613 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 CXorf49A8MYA2 514 aaPredicted RBP14.37□□□□□ -0.11
TRIM4-201ENST00000349062 AMHP03971 560 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 KITP10721 976 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 PYGBP11216 843 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 ERFP50548 548 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 CAP1Q01518 475 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 TRABD2AQ86V40 505 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 NT5DC4Q86YG4 428 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 TTC25Q96NG3 672 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 FAM111AQ96PZ2 611 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 NOP53Q9NZM5 478 aaKnown RBP14.37□□□□□ -0.11
TRIM4-201ENST00000349062 RABGEF1Q9UJ41 708 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 TRPV2Q9Y5S1 764 aa14.37□□□□□ -0.11
TRIM4-201ENST00000349062 PDHA1P08559 390 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 BIRC2Q13490 618 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 AGMOQ6ZNB7 445 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 PCGF5Q86SE9 256 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 TCP10LQ8TDR4 215 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 PGBD4Q96DM1 585 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 FAXDC2Q96IV6 333 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 TRPV6Q9H1D0 765 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 ABI2Q9NYB9 513 aaPredicted RBP14.36□□□□□ -0.11
TRIM4-201ENST00000349062 KLHL8Q9P2G9 620 aaPredicted RBP14.36□□□□□ -0.11
TRIM4-201ENST00000349062 MARCOQ9UEW3 520 aaPredicted RBP14.36□□□□□ -0.11
TRIM4-201ENST00000349062 C2orf71A6NGG8 1288 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 TRIM49D1C9J1S8 452 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 EEF2KO00418 725 aaKnown RBP14.36□□□□□ -0.11
TRIM4-201ENST00000349062 ATP9BO43861 1147 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms