RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 ULBP1Q9BZM6 244 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 PRDM12Q9H4Q4 367 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 ANLNQ9NQW6 1124 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 BATF3Q9NR55 127 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 CDY2AQ9Y6F7 541 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 CDY1Q9Y6F8 540 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 ZC3H4Q9UPT8 1303 aaKnown RBP13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 KIF3CO14782 793 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 THP07101 528 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 PSMB4P28070 264 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 GAD2Q05329 585 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 EML3Q32P44 896 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 RNASEH2BQ5TBB1 312 aaKnown RBP13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 WSCD1Q658N2 575 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 NXF3Q9H4D5 531 aaKnown RBP13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 VANGL2Q9ULK5 521 aa13.5□□□□□ -0.25
DNMT3B-203ENST00000348286 MSCO60682 206 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 THPOP40225 353 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 OR1G1P47890 313 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 NUDT2P50583 147 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 WDR4P57081 412 aaKnown RBP13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 OGDHQ02218 1023 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 XRCC4Q13426 336 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 ZNF235Q14590 738 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 ANKRD20A2Q5SQ80 823 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 ANKRD20A1Q5TYW2 823 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 PMF1Q6P1K2 205 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 IFNEQ86WN2 208 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 GALNT4Q8N4A0 578 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 SLC4A11Q8NBS3 891 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 SYT15Q9BQS2 421 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 BTBD10Q9BSF8 475 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 NAT9Q9BTE0 207 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 UPF3AQ9H1J1 476 aaKnown RBP13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 PCDH18Q9HCL0 1135 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 IL1RAPL1Q9NZN1 696 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 USP17L7P0C7H9 530 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 GFAPP14136 432 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 IL1R2P27930 398 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 KPNB1Q14974 876 aaKnown RBP13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 UGP2Q16851 508 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 ACCSLQ4AC99 568 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 SLC45A4Q5BKX6 768 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 RNF43Q68DV7 783 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 ICA1LQ8NDH6 482 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 TWNKQ96RR1 684 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 ILKAPQ9H0C8 392 aaPredicted RBP13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 MINDY3Q9H8M7 445 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 DCDC2Q9UHG0 476 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 RUVBL2Q9Y230 463 aaKnown RBP13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 PPME1Q9Y570 386 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 PMM2O15305 246 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 ARIH2O95376 493 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 GTF2A2P52657 109 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 SNX30Q5VWJ9 437 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 TAS1R3Q7RTX0 852 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 ZDHHC14Q8IZN3 488 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 RNF148Q8N7C7 305 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 PDZD8Q8NEN9 1154 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 OR52K1Q8NGK4 314 aa13.49□□□□□ -0.25
DNMT3B-203ENST00000348286 CILPO75339 1184 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 WNT7BP56706 349 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 CDK16Q00536 496 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 IL1RL1Q01638 556 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 POU5F1Q01860 360 aaKnown RBP13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 PTP4A2Q12974 167 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 TSHZ1Q6ZSZ6 1077 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 RFWD2Q8NHY2 731 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 LPIN3Q9BQK8 851 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 KATNAL1Q9BW62 490 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 VTA1Q9NP79 307 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 PACSIN3Q9UKS6 424 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 PDE5AO76074 875 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 RGS20O76081 388 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 ATXN1P54253 815 aaKnown RBP13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 LCA5Q86VQ0 697 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 TRIML2Q8N7C3 387 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 PLD5Q8N7P1 536 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 MAGEB5Q9BZ81 275 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 LHX5Q9H2C1 402 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 SLC4A7Q9Y6M7 1214 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 CHADO15335 359 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 SH3BP5O60239 455 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 TADA2AO75478 443 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 ICAM3P32942 547 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 SLC1A6P48664 564 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 MED21Q13503 144 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 SLC10A6Q3KNW5 377 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 ANKRD20A4Q4UJ75 823 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 CRELD2Q6UXH1 353 aaPredicted RBP13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 CD101Q93033 1021 aa13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 ZNF317Q96PQ6 595 aaPredicted RBP13.48□□□□□ -0.25
DNMT3B-203ENST00000348286 HERPUD2Q9BSE4 406 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms