RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ZSWIM3Q96MP5 696 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 KLF16Q9BXK1 252 aaPredicted RBP19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 GKN1Q9NS71 199 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 KLHL11Q9NVR0 708 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 DNMT3LQ9UJW3 386 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 JRKLQ9Y4A0 524 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 UNC80Q8N2C7 3258 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 FGF19O95750 216 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 HOXB8P17481 243 aaPredicted RBP19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 CTNNA1P35221 906 aaKnown RBP19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 KCNQ1P51787 676 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 TBX4P57082 545 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 TRIP4Q15650 581 aaPredicted RBP19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 CLUL1Q15846 466 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 CA9Q16790 459 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 SMTNL2Q2TAL5 461 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 KCNT1Q5JUK3 1230 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 SERPINB11Q96P15 392 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 SMG9Q9H0W8 520 aaKnown RBP19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 ADAM7Q9H2U9 754 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 SMPD4Q9NXE4 827 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 MRPS23Q9Y3D9 190 aaKnown RBP19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 PCDHA3Q9Y5H8 950 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 SNX10Q9Y5X0 201 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 DENND4AQ7Z401 1863 aa19.76■□□□□ 0.75
CHMP4A-201ENST00000347519 F9P00740 461 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 IGLV3-27P01718 113 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 RARAP10276 462 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 MBL2P11226 248 aaPredicted RBP19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 HDCP19113 662 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 GBP1P32455 592 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 CBX2Q14781 532 aaPredicted RBP19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 RPS6KA1Q15418 735 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 DCAF12L1Q5VU92 463 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 RHOT1Q8IXI2 618 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 ADAMTS19Q8TE59 1207 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 CDK5RAP1Q96SZ6 601 aaKnown RBP19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 PSMB7Q99436 277 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 NAPGQ99747 312 aaPredicted RBP19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 SNRNP25Q9BV90 132 aaKnown RBP19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 NACA2Q9H009 215 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 TASP1Q9H6P5 420 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 XPO7Q9UIA9 1087 aaKnown RBP19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 TLR6Q9Y2C9 796 aa19.75■□□□□ 0.75
CHMP4A-201ENST00000347519 KCNU1A8MYU2 1149 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 ZNF197O14709 1029 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 PSTPIP1O43586 416 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 PRPSAP2O60256 369 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 FSHRP23945 695 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 CASQ1P31415 396 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 HADHQ16836 314 aaKnown RBP19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 AADACL2Q6P093 401 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 ANKS1BQ7Z6G8 1248 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 TADA2BQ86TJ2 420 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 ZNF592Q92610 1267 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 TKTL2Q9H0I9 626 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 ARHGEF38Q9NXL2 777 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 FZD10Q9ULW2 581 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 CPQQ9Y646 472 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 BRWD1Q9NSI6 2320 aa19.74■□□□□ 0.75
CHMP4A-201ENST00000347519 TRAV19A0A0A6YYK7 116 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 CTAGE9A4FU28 777 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 IRF1P10914 325 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 DESP17661 470 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 ADRA1BP35368 520 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 ARSEP51690 589 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 SLC7A9P82251 487 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 NNTQ13423 1086 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 LRRC38Q5VT99 294 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 PYROXD2Q8N2H3 581 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 RIN3Q8TB24 985 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 PPM1EQ8WY54 764 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 RAPGEF5Q92565 580 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 HSPH1Q92598 858 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 RNF34Q969K3 372 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 NCAPGQ9BPX3 1015 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 WDCPQ9H6R7 721 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 HBS1LQ9Y450 684 aaKnown RBP19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 NUP210Q8TEM1 1887 aaPredicted RBP19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 CLUHO75153 1309 aa19.73■□□□□ 0.75
CHMP4A-201ENST00000347519 CCDC66A2RUB6 948 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 MIF4GDA9UHW6 222 aaKnown RBP19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 PI4K2BG5E9Z4 385 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 SRGAP2O75044 1071 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 STC2O76061 302 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 KLKB1P03952 638 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 CKMP06732 381 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 CD48P09326 243 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 FOSL2P15408 326 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 DDX6P26196 483 aaKnown RBP eCLIP19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 CXCR5P32302 372 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 GGCXP38435 758 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 ITIH3Q06033 890 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 ZNF211Q13398 564 aaPredicted RBP19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 PPP2R5DQ14738 602 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 ARHGAP15Q53QZ3 475 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 ARTNQ5T4W7 220 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 ERMARDQ5T6L9 678 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 PAPD7Q5XG87 772 aaKnown RBP19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 SND1Q7KZF4 910 aaKnown RBP eCLIP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms