RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 SKAP2O75563 359 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 ARHGDIBP52566 201 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 ZNF438Q7Z4V0 828 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 GTF3C2Q8WUA4 911 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 CAPGP40121 348 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 RPL5P46777 297 aaKnown RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 MYL6P60660 151 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 CAMK2GQ13555 558 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 OSBPL11Q9BXB4 747 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 SNX9Q9Y5X1 595 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 GRTP1Q5TC63 336 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 DHRSXQ8N5I4 330 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 DNAJB2P25686 324 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 PTGES3Q15185 160 aaKnown RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 PREPLQ4J6C6 727 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 MACC1Q6ZN28 852 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 CCDC185Q8N715 623 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 UTP15Q8TED0 518 aaKnown RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 FAM120BQ96EK7 910 aaKnown RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 ITGB3BPQ13352 177 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 VPS72Q15906 364 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 SCARA3Q6AZY7 606 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 TMC3Q7Z5M5 1100 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 RACGAP1Q9H0H5 632 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 NDUFAF1Q9Y375 327 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 KIF28PB7ZC32 967 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 PDGFRBP09619 1106 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 YWHAZP63104 245 aaKnown RBP19.85■□□□□ 0.77
HDAC4-201ENST00000345617 LRRC71Q8N4P6 559 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 C2CD2Q9Y426 696 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 MSLNQ13421 630 aaPredicted RBP19.85■□□□□ 0.77
HDAC4-201ENST00000345617 ZNF284Q2VY69 593 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 IL31Q6EBC2 164 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 ARMC6Q6NXE6 501 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 ADI1Q9BV57 179 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 GPAT2Q6NUI2 795 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 RNF149Q8NC42 400 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 SLITRK1Q96PX8 696 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 TRPM5Q9NZQ8 1165 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 TRIM10Q9UDY6 481 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 KCNQ3O43525 872 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 ALADP13716 330 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 KDELC2Q7Z4H8 507 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 PRKD2Q9BZL6 878 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 RUVBL2Q9Y230 463 aaKnown RBP19.85■□□□□ 0.77
HDAC4-201ENST00000345617 QPRTQ15274 297 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 QRICH1Q2TAL8 776 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 RPS6KA6Q9UK32 745 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 MBD5Q9P267 1494 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 INPP4BO15327 924 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 HPGDP15428 266 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 PWP1Q13610 501 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 CCNG2Q16589 344 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 CCNB1IP1Q9NPC3 277 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 ENTPD7Q9NQZ7 604 aa19.85■□□□□ 0.77
HDAC4-201ENST00000345617 CYP2C9P11712 490 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 ATXN10Q9UBB4 475 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 RAB21Q9UL25 225 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 ACTL7BQ9Y614 415 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 STARP49675 285 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 OVGP1Q12889 678 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 CUL2Q13617 745 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 LBHD1Q9BQE6 289 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-201ENST00000345617 PIDD1Q9HB75 910 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 RNF146Q9NTX7 359 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 PRMT7Q9NVM4 692 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-201ENST00000345617 ITGADQ13349 1161 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 MSL3Q8N5Y2 521 aaKnown RBP19.84■□□□□ 0.77
HDAC4-201ENST00000345617 SGF29Q96ES7 293 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 DCUN1D5Q9BTE7 237 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 COPS7BQ9H9Q2 264 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-201ENST00000345617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.84■□□□□ 0.77
HDAC4-201ENST00000345617 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.84■□□□□ 0.777e-7■■■■□ 19.5
HDAC4-201ENST00000345617 NUDT5Q9UKK9 219 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 DMTF1Q9Y222 760 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 ZNF24P17028 368 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 DDX53Q86TM3 631 aaKnown RBP19.84■□□□□ 0.77
HDAC4-201ENST00000345617 CD302Q8IX05 232 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 B3GALT6Q96L58 329 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 DCLK3Q9C098 648 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 PI16Q6UXB8 463 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 EPB41L4AQ9HCS5 686 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-201ENST00000345617 PADI4Q9UM07 663 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 USP18Q9UMW8 372 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 USP17L10C9JJH3 530 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 FBXO21O94952 628 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 CPA3P15088 417 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 SYTL1Q8IYJ3 562 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 NEXMIFQ5QGS0 1516 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 KLRC1P26715 233 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 AGKQ53H12 422 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 LRRC17Q8N6Y2 441 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 HPDLQ96IR7 371 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 MMP19Q99542 508 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 KLHL1Q9NR64 748 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 LNPEPQ9UIQ6 1025 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 AK5Q9Y6K8 562 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 ZMYM2Q9UBW7 1377 aa19.84■□□□□ 0.77
HDAC4-201ENST00000345617 DEPDC4Q8N2C3 294 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms