RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 NAALADL1Q9UQQ1 740 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 DENND4CQ5VZ89 1909 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 ANAPC1Q9H1A4 1944 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 SIGLEC16A6NMB1 481 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 DDX3XO00571 662 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNCA-202ENST00000345009 DAB1O75553 588 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 GRAP2O75791 330 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 IPO7O95373 1038 aaKnown RBP12.34□□□□□ -0.43
SNCA-202ENST00000345009 NFATC1O95644 943 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 GLULP15104 373 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 CHKAP35790 457 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 SLC11A2P49281 568 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 MRE11P49959 708 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 GSCP56915 257 aaPredicted RBP12.34□□□□□ -0.43
SNCA-202ENST00000345009 GSDMDP57764 484 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 GPC5P78333 572 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 RING1Q06587 406 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 USP4Q13107 963 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 TRIP4Q15650 581 aaPredicted RBP12.34□□□□□ -0.43
SNCA-202ENST00000345009 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 ITPRIPL2Q3MIP1 535 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 CCDC122Q5T0U0 273 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 DNAJC24Q6P3W2 148 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 ALKBH5Q6P6C2 394 aaKnown RBP12.34□□□□□ -0.43
SNCA-202ENST00000345009 HTR3DQ70Z44 454 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 DEFB106AQ8N104 65 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 OSCP1Q8WVF1 389 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 EDAQ92838 391 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 RNF34Q969K3 372 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 DDX50Q9BQ39 737 aaKnown RBP12.34□□□□□ -0.43
SNCA-202ENST00000345009 PLA2G2FQ9BZM2 168 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 SMOC2Q9H3U7 446 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 FAM204AQ9H8W3 233 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 ARHGAP20Q9P2F6 1191 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 TJP2Q9UDY2 1190 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 SFMBT1Q9UHJ3 866 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 TLR6Q9Y2C9 796 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 SCINQ9Y6U3 715 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 F5P12259 2224 aa12.34□□□□□ -0.43
SNCA-202ENST00000345009 MDM4O15151 490 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 NRDCO43847 1150 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 TRUB2O95900 331 aaKnown RBP12.33□□□□□ -0.44
SNCA-202ENST00000345009 APOEP02649 317 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 FYNP06241 537 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 PLEKP08567 350 aaPredicted RBP12.33□□□□□ -0.44
SNCA-202ENST00000345009 IRF1P10914 325 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 PDGFRAP16234 1089 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 SDC4P31431 198 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.44
SNCA-202ENST00000345009 TBX4P57082 545 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 ZXDAP98168 799 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 TAF5Q15542 800 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 SLC25A52Q3SY17 297 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 C2CD6Q53TS8 623 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 C10orf76Q5T2E6 689 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 SYPL2Q5VXT5 272 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 WDR59Q6PJI9 974 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 MON1BQ7L1V2 547 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 TMTC1Q8IUR5 882 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 CCDC170Q8IYT3 715 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 TC2NQ8N9U0 490 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 SPC24Q8NBT2 197 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 DQX1Q8TE96 717 aaKnown RBP12.33□□□□□ -0.44
SNCA-202ENST00000345009 RSPRY1Q96DX4 576 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 MSANTD3Q96H12 275 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 LRRC3BQ96PB8 259 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 FAM83CQ9BQN1 747 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 ISCUQ9H1K1 167 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 C8orf33Q9H7E9 229 aaPredicted RBP12.33□□□□□ -0.44
SNCA-202ENST00000345009 NHEJ1Q9H9Q4 299 aaPredicted RBP12.33□□□□□ -0.44
SNCA-202ENST00000345009 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNCA-202ENST00000345009 DDIT4Q9NX09 232 aa12.33□□□□□ -0.44
SNCA-202ENST00000345009 MYO16Q9Y6X6 1858 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 A0A087X0T9 212 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 FAM170AA1A519 330 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 C3orf80F5H4A9 247 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 M0QYT0 321 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 MAN2B1O00754 1011 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 STC2O76061 302 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 LATS1O95835 1130 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 ADH1CP00326 375 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 HMBSP08397 361 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 FAM228BP0C875 321 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 RRM1P23921 792 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 CCR1P32246 355 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 CYLC1P35663 651 aaPredicted RBP12.32□□□□□ -0.44
SNCA-202ENST00000345009 SIGLEC14Q08ET2 396 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 PTP4A2Q12974 167 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 RUNX3Q13761 415 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 SPA17Q15506 151 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 SLC44A4Q53GD3 710 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 ACBD5Q5T8D3 534 aaPredicted RBP12.32□□□□□ -0.44
SNCA-202ENST00000345009 AZIN2Q96A70 460 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 ZNF653Q96CK0 615 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 DDX23Q9BUQ8 820 aaKnown RBP12.32□□□□□ -0.44
SNCA-202ENST00000345009 COL25A1Q9BXS0 654 aaPredicted RBP12.32□□□□□ -0.44
SNCA-202ENST00000345009 EBF3Q9H4W6 596 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 METTL5Q9NRN9 209 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms