RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ACBD5Q5T8D3 534 aaPredicted RBP16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 ANKRD52Q8NB46 1076 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 C9orf72Q96LT7 481 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 RASSF4Q9H2L5 321 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 KCNF1Q9H3M0 494 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 DHX33Q9H6R0 707 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 ARHGAP20Q9P2F6 1191 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 E5RJQ4 531 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 TSPAN1O60635 241 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 EOMESO95936 686 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 GJA9P57773 515 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 PDCLQ13371 301 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 CCDC38Q502W7 563 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 TTC39BQ5VTQ0 682 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 KCNT2Q6UVM3 1135 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 NAT16Q8N8M0 369 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 GBP7Q8N8V2 638 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 TASP1Q9H6P5 420 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 RBM22Q9NW64 420 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 RARGP13631 454 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 ILF2Q12905 390 aaKnown RBP16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 COBLL1Q53SF7 1204 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 PIGZQ86VD9 579 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 WNT8BQ93098 351 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 LENG9Q96B70 501 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 ATP6V1G3Q96LB4 118 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 PACSIN1Q9BY11 444 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 SPECC1L-ADORA2AF8WAN1 911 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 AGRPO00253 132 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 RAD51CO43502 376 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 TLR5O60602 858 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 PRLRP16471 622 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 PDCD7Q8N8D1 485 aaKnown RBP16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 SNX31Q8N9S9 440 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 LRRC40Q9H9A6 602 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 CAPN7Q9Y6W3 813 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 ARL5CA6NH57 179 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 SUPT3HB4E1H0 165 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 SUPT3HO75486 399 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 ARL2P36404 184 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 DLG4P78352 724 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 IL1RL1Q01638 556 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 MAPRE2Q15555 327 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 LRIG3Q6UXM1 1119 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 RIBC1Q8N443 379 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 KREMEN2Q8NCW0 462 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 FAM167BQ9BTA0 163 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 KLRC4O43908 158 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 DIAPH2O60879 1101 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 C8AP07357 584 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 HIST2H2ACQ16777 129 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 MUM1Q2TAK8 710 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 HIST2H2AA3Q6FI13 130 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 DENND1CQ8IV53 801 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 MMGT1Q8N4V1 131 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 PKD2L2Q9NZM6 624 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 TRHDEQ9UKU6 1024 aa16.88■□□□□ 0.29
SMARCA4-201ENST00000344626 CLDN5O00501 218 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 FGF10O15520 208 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 SRP72O76094 671 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 CLCNKBP51801 687 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 CCNG2Q16589 344 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 C9orf57Q5W0N0 161 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 SIAH1Q8IUQ4 282 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 MFSD14AQ96MC6 490 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 ROPN1BQ9BZX4 212 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 TKTL2Q9H0I9 626 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 ROPN1Q9HAT0 212 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 NID2Q14112 1375 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 VPS26AO75436 327 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 CYP2A6P11509 494 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 AUTS2Q8WXX7 1259 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 KITP10721 976 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 CYP3A5P20815 502 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 CLK2P49760 499 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 ZACNQ401N2 412 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 FBXL19Q6PCT2 694 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 C4orf32Q8N8J7 132 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 NCLNQ969V3 563 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 MTMR8Q96EF0 704 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 RMDN2Q96LZ7 410 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 FICDQ9BVA6 458 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 C1QTNF7Q9BXJ2 289 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 ALG13Q9NP73 1137 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 B4GALT4O60513 344 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 H2AFYO75367 372 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 HSPA9P38646 679 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 THOP1P52888 689 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 POLR2LP62875 67 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 EIF2B5Q13144 721 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 HIC1Q14526 733 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 FAM47EQ6ZV65 393 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 KLHL29Q96CT2 875 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 ISCUQ9H1K1 167 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 ZNF510Q9Y2H8 683 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 RPS6KL1Q9Y6S9 549 aa16.87■□□□□ 0.29
SMARCA4-201ENST00000344626 A0A0B4J269 797 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 TRDMT1O14717 391 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 SOAT2O75908 522 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms