RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 CLDN25C9JDP6 229 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 HSF2Q03933 536 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 NFIL3Q16649 462 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 LOC110117498-PIK3R3F6TDL0 507 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 AGPSO00116 658 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 CYP11B2P19099 503 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 SPIRE1Q08AE8 756 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 TCP10Q12799 353 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 ALYREFQ86V81 257 aaKnown RBP13.97□□□□□ -0.17
TRIO-202ENST00000344204 ZSWIM2Q8NEG5 633 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 KLHL18O94889 574 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 BMP10O95393 424 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 ITGAXP20702 1163 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 RBM20Q5T481 1227 aaKnown RBP13.97□□□□□ -0.17
TRIO-202ENST00000344204 STK32CQ86UX6 486 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 CCDC28AQ8IWP9 274 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 C12orf56Q8IXR9 622 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 RPF1Q9H9Y2 349 aaKnown RBP13.97□□□□□ -0.17
TRIO-202ENST00000344204 KIAA0391O15091 583 aaKnown RBP13.97□□□□□ -0.17
TRIO-202ENST00000344204 HUS1O60921 280 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 CCNB1P14635 433 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 LRRC42Q9Y546 428 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 ATG7O95352 703 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 ZSWIM7Q19AV6 140 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 ERICH5Q6P6B1 374 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 CYP4V2Q6ZWL3 525 aaPredicted RBP13.97□□□□□ -0.17
TRIO-202ENST00000344204 MYDGFQ969H8 173 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 SP140LQ9H930 580 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 SLC16A2P36021 539 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 GLRA4Q5JXX5 417 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 RAB2BQ8WUD1 216 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 DYNLL2Q96FJ2 89 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 NAT9Q9BTE0 207 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 TRMT6Q9UJA5 497 aaKnown RBP13.97□□□□□ -0.17
TRIO-202ENST00000344204 LINGO3P0C6S8 592 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 PYDC2Q56P42 97 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 EIF3MQ7L2H7 374 aaKnown RBP13.97□□□□□ -0.17
TRIO-202ENST00000344204 ZNF677Q86XU0 584 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 FAM20AQ96MK3 541 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 CASP4P49662 377 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 JAK3P52333 1124 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 PDK1Q15118 436 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 UNC45BQ8IWX7 931 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 ENOPH1Q9UHY7 261 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 KIF13AQ9H1H9 1805 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 UBDO15205 165 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 TLR2O60603 784 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 RNF148Q8N7C7 305 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 PIK3C3Q8NEB9 887 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 OSGEPQ9NPF4 335 aa13.97□□□□□ -0.17
TRIO-202ENST00000344204 AVENQ9NQS1 362 aaPredicted RBP13.97□□□□□ -0.17
TRIO-202ENST00000344204 CLRN2A0PK11 232 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 BTNL10A8MVZ5 291 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 ZNF682O95780 498 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 TOB1P50616 345 aaPredicted RBP13.96□□□□□ -0.17
TRIO-202ENST00000344204 ZBTB33Q86T24 672 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 FAM47BQ8NA70 645 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 ATG16L2Q8NAA4 619 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 FAR1Q8WVX9 515 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 EGFL8Q99944 293 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 CPSF3Q9UKF6 684 aaKnown RBP13.96□□□□□ -0.17
TRIO-202ENST00000344204 FBP2O00757 339 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 SLC16A4O15374 487 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 COBLL1Q53SF7 1204 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 DGKKQ5KSL6 1271 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 FEZF2Q8TBJ5 459 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 FAM213AQ9BRX8 229 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 SLCO1B3Q9NPD5 702 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRIO-202ENST00000344204 CHORDC1Q9UHD1 332 aaPredicted RBP13.96□□□□□ -0.17
TRIO-202ENST00000344204 RIMBP2O15034 1052 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 ZDHHC13Q8IUH4 622 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 A0A0G2JPF8 293 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 C5orf60A6NFR6 353 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 HNRNPCL3B7ZW38 293 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 HNRNPCL4P0DMR1 293 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 GTF2H3Q13889 308 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 EFHC2Q5JST6 749 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 ACAD10Q6JQN1 1059 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 PCDHGB4Q9UN71 923 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 HOXA13P31271 388 aaPredicted RBP13.96□□□□□ -0.17
TRIO-202ENST00000344204 CDC16Q13042 620 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 CCDC36Q8IYA8 594 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 NRBP2Q9NSY0 501 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 WASF2Q9Y6W5 498 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 ZBTB5O15062 677 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 MAGEC1O60732 1142 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 ZNF806P0C7X5 589 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 AKAP5P24588 427 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 FNDC8Q8TC99 324 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 PFDN2Q9UHV9 154 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 RPL26P61254 145 aaKnown RBP13.96□□□□□ -0.17
TRIO-202ENST00000344204 GALNTL6Q49A17 601 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 GSTCDQ8NEC7 633 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 PPP1R2P1Q96PQ5 205 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 SLC25A23Q9BV35 468 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 SEMA6BQ9H3T3 888 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 RIBC2Q9H4K1 309 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 NKX1-2Q9UD57 310 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms