RNA–Protein interactions for RNA: ENST00000343131.6

SYCE1-202, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYCE1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-202ENST00000343131 MRGPRX1Q96LB2 322 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 HSPA12BQ96MM6 686 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 STRIP2Q9ULQ0 834 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 CLEC4EQ9ULY5 219 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 CFAP47Q6ZTR5 3102 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 CACNA1EQ15878 2313 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 O00370 1275 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 PIK3R2O00459 728 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 MSI1O43347 362 aaKnown RBP16.59■□□□□ 0.25
SYCE1-202ENST00000343131 CALCAP01258 141 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 FMO5P49326 533 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 BST2Q10589 180 aaKnown RBP16.59■□□□□ 0.25
SYCE1-202ENST00000343131 PEAR1Q5VY43 1037 aaPredicted RBP16.59■□□□□ 0.25
SYCE1-202ENST00000343131 ANKS1BQ7Z6G8 1248 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 FMNL3Q8IVF7 1028 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 SLC41A1Q8IVJ1 513 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 KAT5Q92993 513 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 IPO9Q96P70 1041 aaKnown RBP16.59■□□□□ 0.25
SYCE1-202ENST00000343131 NUSAP1Q9BXS6 441 aaKnown RBP16.59■□□□□ 0.25
SYCE1-202ENST00000343131 DCLK3Q9C098 648 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 LRRC4Q9HBW1 653 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 HESX1Q9UBX0 185 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 FBXO10Q9UK96 956 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 ZNF510Q9Y2H8 683 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 STON1Q9Y6Q2 735 aa16.59■□□□□ 0.25
SYCE1-202ENST00000343131 SPEGQ15772 3267 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 YJEFN3A6XGL0 299 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 E7ENQ6 273 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 PSMA7O14818 248 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 CHKAP35790 457 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 IL12RB1P42701 662 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 ZNF33AQ06730 810 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 LMAN2Q12907 356 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 FUT11Q495W5 492 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 SPDYCQ5MJ68 293 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 PM20D1Q6GTS8 502 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 KLHL10Q6JEL2 608 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 SIX6OS1Q8N1H7 587 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 DEFB124Q8NES8 71 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 OR2I1PQ8NGU4 316 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 SORCS1Q8WY21 1168 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 TFAP2BQ92481 460 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 PLD4Q96BZ4 506 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 GTPBP2Q9BX10 602 aaKnown RBP16.58■□□□□ 0.24
SYCE1-202ENST00000343131 UBXN6Q9BZV1 441 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 FAM124BQ9H5Z6 455 aaPredicted RBP16.58■□□□□ 0.24
SYCE1-202ENST00000343131 MAN1B1Q9UKM7 699 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 SLC27A6Q9Y2P4 619 aa16.58■□□□□ 0.24
SYCE1-202ENST00000343131 ZBTB24O43167 697 aaPredicted RBP16.57■□□□□ 0.24
SYCE1-202ENST00000343131 TSPAN3O60637 253 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 SETSIPP0DME0 302 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 LCP1P13796 627 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 RGS7P49802 495 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 YWHAEP62258 255 aaKnown RBP16.57■□□□□ 0.24
SYCE1-202ENST00000343131 SHC2P98077 582 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 FOXC1Q12948 553 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 CCDC40Q4G0X9 1142 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 SLC23A3Q6PIS1 610 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 TMEM270Q6UE05 265 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 SLC36A4Q6YBV0 504 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 FAM217AQ8IXS0 508 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 TRIML1Q8N9V2 468 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 DDI1Q8WTU0 396 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 PIWIL1Q96J94 861 aaKnown RBP16.57■□□□□ 0.24
SYCE1-202ENST00000343131 ZSWIM1Q9BR11 485 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 CIPCQ9C0C6 399 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 MKRN2Q9H000 416 aaKnown RBP16.57■□□□□ 0.24
SYCE1-202ENST00000343131 SFMBT1Q9UHJ3 866 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 CTNND2Q9UQB3 1225 aa16.57■□□□□ 0.24
SYCE1-202ENST00000343131 TMEM131Q92545 1883 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 M0QYV0 167 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 GFRA2O00451 464 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 ZNF217O75362 1048 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 CYBBP04839 570 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 SPINK2P20155 84 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 TBXAS1P24557 533 aaPredicted RBP16.56■□□□□ 0.24
SYCE1-202ENST00000343131 PRKCHP24723 683 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 BRD2P25440 801 aaKnown RBP16.56■□□□□ 0.24
SYCE1-202ENST00000343131 HOXD9P28356 352 aaPredicted RBP16.56■□□□□ 0.24
SYCE1-202ENST00000343131 HOXD12P35452 270 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 SGSHP51688 502 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 STIM1Q13586 685 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 BECN1Q14457 450 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 ZNF234Q14588 700 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 STARD3Q14849 445 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 NUMA1Q14980 2115 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 TRIP4Q15650 581 aaPredicted RBP16.56■□□□□ 0.24
SYCE1-202ENST00000343131 PKDCCQ504Y2 493 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 BSPRYQ5W0U4 402 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 TMEM215Q68D42 235 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 TTI2Q6NXR4 508 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 PPM1KQ8N3J5 372 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 CPXM2Q8N436 756 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 CLEC4CQ8WTT0 213 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 RNF139Q8WU17 664 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 TIGD1Q96MW7 591 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 CAPN10Q9HC96 672 aa16.56■□□□□ 0.24
SYCE1-202ENST00000343131 OLA1Q9NTK5 396 aaKnown RBP16.56■□□□□ 0.24
SYCE1-202ENST00000343131 THAP10Q9P2Z0 257 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms