RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 GSDMBQ8TAX9 411 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 NDRG1Q92597 394 aaKnown RBP24.83■■□□□ 1.57
NELFB-201ENST00000343053 LGMNQ99538 433 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 TTC1Q99614 292 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 TUBB6Q9BUF5 446 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 CYP3A43Q9HB55 503 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 HES2Q9Y543 173 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 LIN7AO14910 233 aaPredicted RBP24.83■■□□□ 1.57
NELFB-201ENST00000343053 OLIG2Q13516 323 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 PDK2Q15119 407 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 BOLA3Q53S33 107 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 LGSNQ5TDP6 509 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 RIPOR1Q6ZS17 1223 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 MOB2Q70IA6 237 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 ATXN7L3BQ96GX2 97 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 C7orf26Q96N11 449 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 ANKRD27Q96NW4 1050 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 EBNA1BP2Q99848 306 aaKnown RBP24.83■■□□□ 1.57
NELFB-201ENST00000343053 SMARCAD1Q9H4L7 1026 aa24.83■■□□□ 1.57
NELFB-201ENST00000343053 BCLAF3A2AJT9 711 aaKnown RBP24.82■■□□□ 1.56
NELFB-201ENST00000343053 KLF11O14901 512 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 BAG2O95816 211 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 SH3D19Q5HYK7 790 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 RSPH3Q86UC2 560 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 PANX3Q96QZ0 392 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 WWP1Q9H0M0 922 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 ZNF180Q9UJW8 692 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 MAGED2Q9UNF1 606 aaPredicted RBP24.82■■□□□ 1.56
NELFB-201ENST00000343053 PSAT1Q9Y617 370 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 HBP1O60381 514 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 BPGMP07738 259 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 PDGFRBP09619 1106 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 CCDC130P13994 396 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 SLC6A3Q01959 620 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 STX3Q13277 289 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 RNF220Q5VTB9 566 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 RTP4Q96DX8 246 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 SEPT10Q9P0V9 454 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 RPL26L1Q9UNX3 145 aaKnown RBP24.82■■□□□ 1.56
NELFB-201ENST00000343053 CEP350Q5VT06 3117 aa24.82■■□□□ 1.56
NELFB-201ENST00000343053 SORBS2O94875 1100 aaKnown RBP24.81■■□□□ 1.56
NELFB-201ENST00000343053 FASTKD1Q53R41 847 aaKnown RBP24.81■■□□□ 1.56
NELFB-201ENST00000343053 SCUBE1Q8IWY4 988 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 ULK2Q8IYT8 1036 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 SH3TC2Q8TF17 1288 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 FAM136AQ96C01 138 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 ZNF778Q96MU6 729 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 PIDD1Q9HB75 910 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 XAB2Q9HCS7 855 aaKnown RBP24.81■■□□□ 1.56
NELFB-201ENST00000343053 KRT82Q9NSB4 513 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 A6NJR5 290 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 FZD9O00144 591 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 CNMDO75829 334 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 MCF2P10911 925 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 GOT1P17174 413 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 CCNFP41002 786 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 INCA1Q0VD86 236 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 PEX6Q13608 980 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 PHC3Q8NDX5 983 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 DDX50Q9BQ39 737 aaKnown RBP24.81■■□□□ 1.56
NELFB-201ENST00000343053 AP4E1Q9UPM8 1137 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 DNAJC16Q9Y2G8 782 aa24.81■■□□□ 1.56
NELFB-201ENST00000343053 FAM159BA6NKW6 160 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 SPECC1L-ADORA2AF8WAN1 911 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 UBTFL6P0CB48 400 aaPredicted RBP24.8■■□□□ 1.56
NELFB-201ENST00000343053 VAV1P15498 845 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 ATICP31939 592 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 GTF2A2P52657 109 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 MRPS35P82673 323 aaKnown RBP24.8■■□□□ 1.56
NELFB-201ENST00000343053 RBP5P82980 135 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 SLC25A3Q00325 362 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 HEATR6Q6AI08 1181 aaKnown RBP24.8■■□□□ 1.56
NELFB-201ENST00000343053 OR6B3Q8NGW1 331 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 STX18Q9P2W9 335 aaKnown RBP24.8■■□□□ 1.56
NELFB-201ENST00000343053 TUBGCP4Q9UGJ1 667 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 SLC7A8Q9UHI5 535 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 TPP1O14773 563 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 C6orf222P0C671 652 aaPredicted RBP24.8■■□□□ 1.56
NELFB-201ENST00000343053 L1CAMP32004 1257 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 SOWAHAQ2M3V2 549 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 PPM1JQ5JR12 505 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 N4BP2L1Q5TBK1 243 aaPredicted RBP24.8■■□□□ 1.56
NELFB-201ENST00000343053 C1orf146Q5VVC0 180 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 ATG14Q6ZNE5 492 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 FAM131BQ86XD5 332 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 CDKL3Q8IVW4 592 aaPredicted RBP24.8■■□□□ 1.56
NELFB-201ENST00000343053 EFCAB3Q8N7B9 438 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 USP6NLQ92738 828 aa24.8■■□□□ 1.56
NELFB-201ENST00000343053 KCTD15Q96SI1 283 aaPredicted RBP24.8■■□□□ 1.56
NELFB-201ENST00000343053 ADM5C9JUS6 153 aa24.79■■□□□ 1.56
NELFB-201ENST00000343053 SP100P23497 879 aaPredicted RBP24.79■■□□□ 1.56
NELFB-201ENST00000343053 THEMIS2Q5TEJ8 643 aa24.79■■□□□ 1.56
NELFB-201ENST00000343053 VWA5B1Q5TIE3 1220 aa24.79■■□□□ 1.56
NELFB-201ENST00000343053 TMPRSS6Q8IU80 811 aa24.79■■□□□ 1.56
NELFB-201ENST00000343053 C18orf25Q96B23 403 aaPredicted RBP24.79■■□□□ 1.56
NELFB-201ENST00000343053 ZNF358Q9NW07 568 aa24.79■■□□□ 1.56
NELFB-201ENST00000343053 TAGLN3Q9UI15 199 aa24.79■■□□□ 1.56
NELFB-201ENST00000343053 PPME1Q9Y570 386 aa24.79■■□□□ 1.56
NELFB-201ENST00000343053 TRDMT1O14717 391 aaKnown RBP24.79■■□□□ 1.56
NELFB-201ENST00000343053 NPTXRO95502 500 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms