RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 TGFB1I1O43294 461 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 RARGP13631 454 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 CYP24A1Q07973 514 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 TEAD4Q15561 434 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 C6orf118Q5T5N4 469 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 GPR155Q7Z3F1 870 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 ZNF366Q8N895 744 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 PLEKHO2Q8TD55 490 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 SLC2A14Q8TDB8 520 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 JAKMIP2Q96AA8 810 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 PCED1AQ9H1Q7 454 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 FBXO44Q9H4M3 255 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 OSGEPQ9NPF4 335 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 CCDC39Q9UFE4 941 aa17.22■□□□□ 0.35
NECTIN1-202ENST00000340882 ENC1O14682 589 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 NPC1O15118 1278 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 CLIC2O15247 247 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 PAPSS1O43252 624 aaPredicted RBP17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 TSPAN3O60637 253 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 BMP15O95972 392 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 PLA2G4AP47712 749 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 CASP4P49662 377 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 GOLGA8FQ08AF8 430 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 GOLGA8DPQ0D2H9 430 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 TRPC3Q13507 836 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 RTP5Q14D33 572 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 SHBQ15464 509 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 SCD5Q86SK9 330 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 C12orf29Q8N999 325 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 OR2T3Q8NH03 318 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 UCMAQ8WVF2 138 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 CIPCQ9C0C6 399 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 LHX5Q9H2C1 402 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 FAM49BQ9NUQ9 324 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 SCML2Q9UQR0 700 aa17.21■□□□□ 0.35
NECTIN1-202ENST00000340882 A0A1B0GTQ1 180 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 TEX51A0A1B0GUA7 166 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 RRP8O43159 456 aaKnown RBP17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 FSBPO95073 299 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 CYP2J2P51589 502 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 CAMK2GQ13555 558 aaPredicted RBP17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 C10orf120Q5SQS8 335 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 HES3Q5TGS1 186 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 SERPINA13PQ6UXR4 307 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 ANKS1BQ7Z6G8 1248 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 SNIP1Q8TAD8 396 aaKnown RBP17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 KIAA1586Q9HCI6 787 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 AGPAT3Q9NRZ7 376 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 PCDHGA1Q9Y5H4 931 aa17.2■□□□□ 0.34
NECTIN1-202ENST00000340882 CAPN9O14815 690 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 RFPL3O75679 317 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 SEMA4FO95754 770 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 WNT1P04628 370 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 HMBSP08397 361 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 CD27P26842 260 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 ADORA2BP29275 332 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 ATICP31939 592 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 ACADVLP49748 655 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 TLE3Q04726 772 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 CCDC173Q0VFZ6 552 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 FBXL19Q6PCT2 694 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 KLHDC10Q6PID8 442 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 CLEC20AQ6ZU45 233 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 SYAP1Q96A49 352 aaPredicted RBP17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 CNDP2Q96KP4 475 aaKnown RBP17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 TNIP3Q96KP6 325 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 SEMA4CQ9C0C4 833 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 VRTNQ9H8Y1 702 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 EBF2Q9HAK2 575 aa17.19■□□□□ 0.34
NECTIN1-202ENST00000340882 DOCK9Q9BZ29 2069 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 BRINP1O60477 761 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 VNN1O95497 513 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 LDOC1O95751 146 aaPredicted RBP17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 IGHV4-34P06331 123 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 C7P10643 843 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 CORO1AP31146 461 aaKnown RBP17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 HNF1BP35680 557 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 NDST1P52848 882 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 RPS14P62263 151 aaKnown RBP17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 CXADRP78310 365 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 ZNF699Q32M78 642 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 EPM2AIP1Q7L775 607 aaPredicted RBP17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 CRYBG2Q8N1P7 616 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 ENGASEQ8NFI3 743 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 CYB5D2Q8WUJ1 264 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 TMX3Q96JJ7 454 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 SLC6A18Q96N87 628 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 NRSN2Q9GZP1 204 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 TMEM245Q9H330 911 aa17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 AGO1Q9UL18 857 aaKnown RBP17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 SRPRBQ9Y5M8 271 aaKnown RBP17.18■□□□□ 0.34
NECTIN1-202ENST00000340882 PHACTR2O75167 634 aa17.17■□□□□ 0.34
NECTIN1-202ENST00000340882 STAT6P42226 847 aa17.17■□□□□ 0.34
NECTIN1-202ENST00000340882 BMT2Q1RMZ1 405 aa17.17■□□□□ 0.34
NECTIN1-202ENST00000340882 ZNF667Q5HYK9 610 aa17.17■□□□□ 0.34
NECTIN1-202ENST00000340882 ADAT2Q7Z6V5 191 aaKnown RBP17.17■□□□□ 0.34
NECTIN1-202ENST00000340882 SPACA3Q8IXA5 215 aa17.17■□□□□ 0.34
NECTIN1-202ENST00000340882 CCDC65Q8IXS2 484 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms