RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PRMT7Q9NVM4 692 aaPredicted RBP11.98□□□□□ -0.49
ATXN3-201ENST00000340660 FAM229AH3BQW9 127 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 TRIM38O00635 465 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 ZBTB39O15060 712 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 YKT6O15498 198 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 SIGLEC6O43699 453 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 LDLRP01130 860 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 NFICP08651 508 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 THEGLP0DJG4 465 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 CD27P26842 260 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 HSPA4P34932 840 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 GPR15P49685 360 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 FAM187BQ17R55 369 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 SLC39A12Q504Y0 691 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 PRRT3Q5FWE3 981 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 MCEMP1Q8IX19 187 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 C9orf43Q8TAL5 461 aaPredicted RBP11.97□□□□□ -0.49
ATXN3-201ENST00000340660 TCTN2Q96GX1 697 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 ADPGKQ9BRR6 497 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 PTPRHQ9HD43 1115 aa11.97□□□□□ -0.49
ATXN3-201ENST00000340660 A0A1B0GVM2 712 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 TSPAN3O60637 253 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 HAPLN1P10915 354 aaPredicted RBP11.96□□□□□ -0.49
ATXN3-201ENST00000340660 RARGP13631 454 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 MX1P20591 662 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 ACSL1P33121 698 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 QARSP47897 775 aaKnown RBP11.96□□□□□ -0.49
ATXN3-201ENST00000340660 LY6G5CQ5SRR4 150 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 SDHAF4Q5VUM1 108 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 OVOS1Q6IE37 1185 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 TMTC3Q6ZXV5 915 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 USP37Q86T82 979 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 HEATR4Q86WZ0 1026 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 CACUL1Q86Y37 369 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 CEP120Q8N960 986 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 EXOC6Q8TAG9 804 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 SLC6A18Q96N87 628 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 OSBPL2Q9H1P3 480 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 DEC1Q9P2X7 70 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 ENTPD2Q9Y5L3 495 aa11.96□□□□□ -0.49
ATXN3-201ENST00000340660 ESPL1Q14674 2120 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 PRRT4C9JH25 899 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 ITGA2BP08514 1039 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 YWHABP31946 246 aaKnown RBP11.95□□□□□ -0.5
ATXN3-201ENST00000340660 GATA4P43694 442 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 MFAP1P55081 439 aaKnown RBP11.95□□□□□ -0.5
ATXN3-201ENST00000340660 ANTXR2P58335 489 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 PRPF4BQ13523 1007 aaKnown RBP11.95□□□□□ -0.5
ATXN3-201ENST00000340660 DOC2BQ14184 412 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 DCAF4L1Q3SXM0 396 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 XKR9Q5GH70 373 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 ATF7IP2Q5U623 682 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 RAB11FIP4Q86YS3 637 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 TMPRSS6Q8IU80 811 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 SIPA1Q96FS4 1042 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 CCDC136Q96JN2 1154 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 LURAP1Q96LR2 239 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 KIF26BQ2KJY2 2108 aa11.95□□□□□ -0.5
ATXN3-201ENST00000340660 FAM155BO75949 473 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 FSBPO95073 299 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
ATXN3-201ENST00000340660 DRD2P14416 443 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 KCNE1P15382 129 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 HDCP19113 662 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 ITGB7P26010 798 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 SLC5A2P31639 672 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 ARRB1P49407 418 aaPredicted RBP11.94□□□□□ -0.5
ATXN3-201ENST00000340660 AARSP49588 968 aaKnown RBP eCLIP11.94□□□□□ -0.5
ATXN3-201ENST00000340660 RACK1P63244 317 aaKnown RBP11.94□□□□□ -0.5
ATXN3-201ENST00000340660 DAB2P98082 770 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 KCNB1Q14721 858 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 MANEAQ5SRI9 462 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
ATXN3-201ENST00000340660 ARMCX5Q6P1M9 558 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 C14orf80Q86SX3 495 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 ERRFI1Q9UJM3 462 aaPredicted RBP11.94□□□□□ -0.5
ATXN3-201ENST00000340660 PCDHB6Q9Y5E3 794 aa11.94□□□□□ -0.5
ATXN3-201ENST00000340660 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.94□□□□□ -0.5
ATXN3-201ENST00000340660 DCHS2Q6V1P9 2916 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 LRRIQ4A6NIV6 560 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 GFRA2O00451 464 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 CSH1P0DML2 217 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 CSH2P0DML3 217 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 RXRGP48443 463 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 COPAP53621 1224 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 GAD2Q05329 585 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 KLRB1Q12918 225 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 ZNF211Q13398 564 aaPredicted RBP11.93□□□□□ -0.5
ATXN3-201ENST00000340660 DSCC1Q9BVC3 393 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 ZCWPW1Q9H0M4 648 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 GZF1Q9H116 711 aaPredicted RBP11.93□□□□□ -0.5
ATXN3-201ENST00000340660 GLT8D2Q9H1C3 349 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 DCTPP1Q9H773 170 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 DNAJB12Q9NXW2 375 aaKnown RBP11.93□□□□□ -0.5
ATXN3-201ENST00000340660 BARHL2Q9NY43 387 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 TUBGCP4Q9UGJ1 667 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 NAGPAQ9UK23 515 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 ACSL6Q9UKU0 697 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 PLXNA2O75051 1894 aa11.93□□□□□ -0.5
ATXN3-201ENST00000340660 ANAPC1Q9H1A4 1944 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms