RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 TWF1Q12792 350 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 DHX34Q14147 1143 aaKnown RBP12.16□□□□□ -0.46
C2orf88-201ENST00000340623 FAXCQ5TGI0 409 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 MON1AQ86VX9 555 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 COLGALT2Q8IYK4 626 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 ARMC5Q96C12 935 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 RAB6BQ9NRW1 208 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 VANGL2Q9ULK5 521 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 FAM187AA6NFU0 413 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 BTNL10A8MVZ5 291 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 CPP00450 1065 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 COILP38432 576 aaPredicted RBP12.15□□□□□ -0.46
C2orf88-201ENST00000340623 GPR15P49685 360 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 EPHB1P54762 984 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 ZNF235Q14590 738 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 ZBTB6Q15916 424 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 PPP2R2DQ66LE6 453 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 ANKRD33Q7Z3H0 272 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 OR10T2Q8NGX3 314 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 WHAMMQ8TF30 809 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 KBTBD7Q8WVZ9 684 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 RAPGEF5Q92565 580 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 PLCD4Q9BRC7 762 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 ASAH2Q9NR71 780 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 UXTQ9UBK9 157 aaPredicted RBP12.15□□□□□ -0.46
C2orf88-201ENST00000340623 APRTP07741 180 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 ETFBP38117 255 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 CDK7P50613 346 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 MMRN1Q13201 1228 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 ZNF662Q6ZS27 426 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 SLC26A9Q7LBE3 791 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 CCDC91Q7Z6B0 441 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 CREG2Q8IUH2 290 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 ARL8AQ96BM9 186 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 TSNARE1Q96NA8 513 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 TMEM121Q9BTD3 319 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 SAYSD1Q9NPB0 183 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 KCND1Q9NSA2 647 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 XPAP23025 273 aaPredicted RBP12.15□□□□□ -0.46
C2orf88-201ENST00000340623 CREMQ03060 361 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 CUL1Q13616 776 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 CDH18Q13634 790 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 ACAP1Q15027 740 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 PDK1Q15118 436 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 RTP2Q5QGT7 225 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 NETO2Q8NC67 525 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 DDI1Q8WTU0 396 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 RAD9AQ99638 391 aa12.15□□□□□ -0.46
C2orf88-201ENST00000340623 C11orf84Q9BUA3 381 aaPredicted RBP12.15□□□□□ -0.46
C2orf88-201ENST00000340623 OLA1Q9NTK5 396 aaKnown RBP12.15□□□□□ -0.46
C2orf88-201ENST00000340623 TRIP12Q14669 1992 aaPredicted RBP12.15□□□□□ -0.46
C2orf88-201ENST00000340623 CCL16O15467 120 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 LRCH4O75427 683 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 FAM153BP0C7A2 387 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 WEE1P30291 646 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 TUBP50607 506 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 DAOAP59103 153 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 SMARCB1Q12824 385 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 P3H1Q32P28 736 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 FAM153CQ494X1 144 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 PABPC1LQ4VXU2 614 aaKnown RBP12.15□□□□□ -0.47
C2orf88-201ENST00000340623 KLHL23Q8NBE8 558 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 ACTRT1Q8TDG2 376 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 ZIM3Q96PE6 472 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 SMOQ99835 787 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 C10orf88Q9H8K7 445 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 FAM153AQ9UHL3 310 aa12.15□□□□□ -0.47
C2orf88-201ENST00000340623 H0Y626 953 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 DAB1O75553 588 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 C8AP07357 584 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 SP100P23497 879 aaPredicted RBP12.14□□□□□ -0.47
C2orf88-201ENST00000340623 KDELR1P24390 212 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 RECQLP46063 649 aaPredicted RBP12.14□□□□□ -0.47
C2orf88-201ENST00000340623 ZNF132P52740 706 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 ATXN1P54253 815 aaKnown RBP12.14□□□□□ -0.47
C2orf88-201ENST00000340623 MAGOHP61326 146 aaKnown RBP12.14□□□□□ -0.47
C2orf88-201ENST00000340623 TRIM71Q2Q1W2 868 aaKnown RBP12.14□□□□□ -0.47
C2orf88-201ENST00000340623 SH3PXD2AQ5TCZ1 1133 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 CCDC63Q8NA47 563 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 RNF217Q8TC41 542 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 STK32AQ8WU08 396 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 FSD1LQ9BXM9 530 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 ITIH3Q06033 890 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 GPM6BQ13491 265 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 CFAP36Q96G28 342 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 CEP41Q9BYV8 373 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 OR12D3Q9UGF7 316 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 TBX21Q9UL17 535 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 MRPS23Q9Y3D9 190 aaKnown RBP12.14□□□□□ -0.47
C2orf88-201ENST00000340623 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.14□□□□□ -0.47
C2orf88-201ENST00000340623 SEC24CP53992 1094 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 ZNF177Q13360 481 aaPredicted RBP12.14□□□□□ -0.47
C2orf88-201ENST00000340623 ANO4Q32M45 955 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 CENPUQ71F23 418 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 TMEM174Q8WUU8 243 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 SLC35F5Q8WV83 523 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 FUBP3Q96I24 572 aaKnown RBP eCLIP12.14□□□□□ -0.47
C2orf88-201ENST00000340623 NKIRAS1Q9NYS0 192 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 CAPN7Q9Y6W3 813 aa12.14□□□□□ -0.47
C2orf88-201ENST00000340623 BAIAP3O94812 1187 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms