RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GRAMD4Q6IC98 578 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 MAMSTRQ6ZN01 415 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 SLC26A9Q7LBE3 791 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 CPXM2Q8N436 756 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 NAT16Q8N8M0 369 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 NAP1L5Q96NT1 182 aaPredicted RBP19.99■□□□□ 0.79
SYNE4-202ENST00000340477 PRMT8Q9NR22 394 aaPredicted RBP19.99■□□□□ 0.79
SYNE4-202ENST00000340477 TJP2Q9UDY2 1190 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 TLR6Q9Y2C9 796 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 TYW5A2RUC4 315 aaKnown RBP19.98■□□□□ 0.79
SYNE4-202ENST00000340477 CACNG3O60359 315 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 TULP3O75386 442 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 DAB1O75553 588 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 NSFP46459 744 aaKnown RBP19.98■□□□□ 0.79
SYNE4-202ENST00000340477 NR1I3Q14994 352 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 GAB4Q2WGN9 574 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 ZNF528Q3MIS6 628 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 FAM102AQ5T9C2 384 aaPredicted RBP19.98■□□□□ 0.79
SYNE4-202ENST00000340477 OLFML1Q6UWY5 402 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 TAC4Q86UU9 113 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 C12orf40Q86WS4 652 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 DDI1Q8WTU0 396 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 IQCDQ96DY2 449 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 NUP58Q9BVL2 599 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 FBRSL1Q9HCM7 1045 aaKnown RBP19.98■□□□□ 0.79
SYNE4-202ENST00000340477 RRN3Q9NYV6 651 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 CACNA1IQ9P0X4 2223 aa19.98■□□□□ 0.79
SYNE4-202ENST00000340477 CACNA1HO95180 2353 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 TBC1D3BA6NDS4 549 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 GRAP2O75791 330 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 TRUB2O95900 331 aaKnown RBP19.97■□□□□ 0.79
SYNE4-202ENST00000340477 IGLV3-27P01718 113 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 FYNP06241 537 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 SLC2A3P11169 496 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 SCNN1AP37088 669 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 PLA2G5P39877 138 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 GABRB2P47870 512 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 SLC6A11P48066 632 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 NRLP54845 237 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 FMO1Q01740 532 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 ASIC2Q16515 512 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 MPPE1Q53F39 396 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 ADGRF1Q5T601 910 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 ETFBKMTQ8IXQ9 262 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 DEFB106AQ8N104 65 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 ZNF397Q8NF99 534 aaPredicted RBP19.97■□□□□ 0.79
SYNE4-202ENST00000340477 RPLP0P6Q8NHW5 317 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 ADAM32Q8TC27 787 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 CPA5Q8WXQ8 436 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 BHMTQ93088 406 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 RNF34Q969K3 372 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 PIWIL1Q96J94 861 aaKnown RBP19.97■□□□□ 0.79
SYNE4-202ENST00000340477 SLC2A13Q96QE2 648 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 FAM126AQ9BYI3 521 aaPredicted RBP19.97■□□□□ 0.79
SYNE4-202ENST00000340477 EDEM3Q9BZQ6 932 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 SLC12A6Q9UHW9 1150 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 STAP1Q9ULZ2 295 aa19.97■□□□□ 0.79
SYNE4-202ENST00000340477 LRRC53A6NM62 1247 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 CBFA2T2O43439 604 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 SP9P0CG40 484 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 TNFRSF4P43489 277 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 DGKGP49619 791 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 SEC13P55735 322 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 MTA1Q13330 715 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 TAF5Q15542 800 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 SFMBT2Q5VUG0 894 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 SYPL2Q5VXT5 272 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 PPP1R2P3Q6NXS1 205 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 FAM217AQ8IXS0 508 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 TERB1Q8NA31 727 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 AZIN2Q96A70 460 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 IRX2Q9BZI1 471 aaPredicted RBP19.96■□□□□ 0.79
SYNE4-202ENST00000340477 TMEM51Q9NW97 253 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 DDIT4Q9NX09 232 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 SLC8A2Q9UPR5 921 aa19.96■□□□□ 0.79
SYNE4-202ENST00000340477 WDFY4Q6ZS81 3184 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 SYNJ2BP-COX16A0A087WUM0 186 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 CHURC1-FNTBB4DL54 471 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 GOLGA8SH3BPF8 625 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 IRAK2O43187 625 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 ACSL4O60488 711 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 PAPSS2O95340 614 aaPredicted RBP19.95■□□□□ 0.78
SYNE4-202ENST00000340477 MOCS2O96007 188 aaPredicted RBP19.95■□□□□ 0.78
SYNE4-202ENST00000340477 PENKP01210 267 aaPredicted RBP19.95■□□□□ 0.78
SYNE4-202ENST00000340477 CYP1A1P04798 512 aaPredicted RBP19.95■□□□□ 0.78
SYNE4-202ENST00000340477 NOS2P35228 1153 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 RNASE9P60153 205 aaKnown RBP19.95■□□□□ 0.78
SYNE4-202ENST00000340477 SATB1Q01826 763 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 GAS6Q14393 721 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 FIGNQ5HY92 759 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 C10orf76Q5T2E6 689 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 MMS22LQ6ZRQ5 1243 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 SND1Q7KZF4 910 aaKnown RBP eCLIP19.95■□□□□ 0.78
SYNE4-202ENST00000340477 TRMT11Q7Z4G4 463 aaKnown RBP19.95■□□□□ 0.78
SYNE4-202ENST00000340477 XYLT1Q86Y38 959 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 ATP6V0D2Q8N8Y2 350 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 AGPAT1Q99943 283 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 NUCKS1Q9H1E3 243 aaKnown RBP19.95■□□□□ 0.78
SYNE4-202ENST00000340477 FAM86C1Q9NVL1 165 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 PLK2Q9NYY3 685 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms