RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 A0A0U1RQF3 1178 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 A0A1W2PQH9 124 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 PHF2O75151 1096 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TFDP3Q5H9I0 405 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 ZNF669Q96BR6 464 aaPredicted RBP13.21□□□□□ -0.29
LIN54-201ENST00000340417 KIAA1522Q9P206 1035 aaPredicted RBP13.21□□□□□ -0.29
LIN54-201ENST00000340417 KIF3CO14782 793 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 ZNF865P0CJ78 1059 aaPredicted RBP13.21□□□□□ -0.3
LIN54-201ENST00000340417 HSPA8P11142 646 aaKnown RBP13.21□□□□□ -0.3
LIN54-201ENST00000340417 HTR1BP28222 390 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 IFNA8P32881 189 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 CAMK2GQ13555 558 aaPredicted RBP13.21□□□□□ -0.3
LIN54-201ENST00000340417 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 ASTN1O14525 1302 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 SUPT3HB4E1H0 165 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 SUPT3HO75486 399 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 ST3GAL1Q11201 340 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 C12orf29Q8N999 325 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 DNAJC19Q96DA6 116 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 TBCBQ99426 244 aa13.21□□□□□ -0.3
LIN54-201ENST00000340417 PTPRJQ12913 1337 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 INPPL1O15357 1258 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 GYPCP04921 128 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 PLEKP08567 350 aaPredicted RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 TYMPP19971 482 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 SULT2A1Q06520 285 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 ADCY2Q08462 1091 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 C11orf96Q7Z7L8 435 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 TMEM192Q8IY95 271 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 SLC13A1Q9BZW2 595 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 COL22A1Q8NFW1 1626 aaPredicted RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 XPO1O14980 1071 aaKnown RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 ITGBL1O95965 494 aaPredicted RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 GDI1P31150 447 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 STIP1P31948 543 aaKnown RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 LPIN1Q14693 890 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 IL17AQ16552 155 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 KCTD16Q68DU8 428 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 SIAH1Q8IUQ4 282 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 MAGEB10Q96LZ2 347 aaPredicted RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 MTHFRP42898 656 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 EIF3BP55884 814 aaKnown RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 TTC7BQ86TV6 843 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 MYCBPAPQ8TBZ2 947 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 B3GALT6Q96L58 329 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 PTPN18Q99952 460 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 ACBD6Q9BR61 282 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 ZYG11BQ9C0D3 744 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 CCDC195A0A1B0GUA6 201 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 FGF10O15520 208 aaPredicted RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 GLIS3Q8NEA6 775 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 MYOCQ99972 504 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 TRMT61BQ9BVS5 477 aaKnown RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 EPC1Q9H2F5 836 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 PLK2Q9NYY3 685 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 OR12D3Q9UGF7 316 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 PROSCO94903 275 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 TRIM16O95361 564 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 ZNF135P52742 658 aaPredicted RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 METTL3Q86U44 580 aaKnown RBP13.2□□□□□ -0.3
LIN54-201ENST00000340417 LEMD2Q8NC56 503 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 CABS1Q96KC9 395 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 LRGUKQ96M69 825 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 ZIC5Q96T25 663 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 DZANK1Q9NVP4 752 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 PCDHGB4Q9UN71 923 aa13.2□□□□□ -0.3
LIN54-201ENST00000340417 A0A1B0GUA9 196 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 GRM6O15303 877 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 GRK3P35626 688 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 DAB2P98082 770 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 E2F4Q16254 413 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 MFSD5Q6N075 450 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 DDIASQ8IXT1 998 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 ARHGAP28Q9P2N2 729 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 ASB3Q9Y575 518 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 SPACA6W5XKT8 324 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 CHD4Q14839 1912 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 NCF2P19878 526 aaPredicted RBP13.19□□□□□ -0.3
LIN54-201ENST00000340417 CYP4F8P98187 520 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 TCEA2Q15560 299 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 HYIQ5T013 277 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 MTSS1LQ765P7 747 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 TM6SF2Q9BZW4 377 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 CNGB3Q9NQW8 809 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 EPHX1P07099 455 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 AMPD1P23109 780 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 NCAPHQ15003 741 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 TEAD4Q15561 434 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 PPP1R26Q5T8A7 1209 aaPredicted RBP13.19□□□□□ -0.3
LIN54-201ENST00000340417 FAM183BPQ6ZVS7 135 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 ARL14EPQ8N8R7 260 aaPredicted RBP13.19□□□□□ -0.3
LIN54-201ENST00000340417 TRAIPQ9BWF2 469 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 FRMD8P1Q9BZ68 369 aaPredicted RBP13.19□□□□□ -0.3
LIN54-201ENST00000340417 UTP6Q9NYH9 597 aaKnown RBP13.19□□□□□ -0.3
LIN54-201ENST00000340417 UBP1Q9NZI7 540 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms