RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 FDFT1P37268 417 aa15.13■□□□□ 0.01
RET-201ENST00000340058 NNMTP40261 264 aa15.13■□□□□ 0.01
RET-201ENST00000340058 ZNF143P52747 638 aaPredicted RBP15.13■□□□□ 0.01
RET-201ENST00000340058 NBPF20Q3BBV1 942 aa15.13■□□□□ 0.01
RET-201ENST00000340058 DUSP28Q4G0W2 176 aa15.13■□□□□ 0.01
RET-201ENST00000340058 PCSK9Q8NBP7 692 aaKnown RBP15.13■□□□□ 0.01
RET-201ENST00000340058 SHCBP1Q8NEM2 672 aa15.13■□□□□ 0.01
RET-201ENST00000340058 EFHD1Q9BUP0 239 aa15.13■□□□□ 0.01
RET-201ENST00000340058 LRRC40Q9H9A6 602 aa15.13■□□□□ 0.01
RET-201ENST00000340058 NDE1Q9NXR1 346 aa15.13■□□□□ 0.01
RET-201ENST00000340058 SCOCQ9UIL1 159 aa15.13■□□□□ 0.01
RET-201ENST00000340058 RUVBL2Q9Y230 463 aaKnown RBP15.13■□□□□ 0.01
RET-201ENST00000340058 PHGDHO43175 533 aaKnown RBP15.13■□□□□ 0.01
RET-201ENST00000340058 CCR1P32246 355 aa15.13■□□□□ 0.01
RET-201ENST00000340058 CSHL1Q14406 222 aa15.13■□□□□ 0.01
RET-201ENST00000340058 SH3PXD2AQ5TCZ1 1133 aa15.13■□□□□ 0.01
RET-201ENST00000340058 THEMIS2Q5TEJ8 643 aa15.13■□□□□ 0.01
RET-201ENST00000340058 OR52K1Q8NGK4 314 aa15.13■□□□□ 0.01
RET-201ENST00000340058 PHF21BQ96EK2 531 aa15.13■□□□□ 0.01
RET-201ENST00000340058 LRRC19Q9H756 370 aa15.13■□□□□ 0.01
RET-201ENST00000340058 HMGXB4Q9UGU5 601 aa15.13■□□□□ 0.01
RET-201ENST00000340058 L3MBTL1Q9Y468 752 aa15.13■□□□□ 0.01
RET-201ENST00000340058 RNF103-CHMP3A0A140T963 221 aa15.13■□□□□ 0.01
RET-201ENST00000340058 SUPT3HB4E1H0 165 aa15.13■□□□□ 0.01
RET-201ENST00000340058 SUPT3HO75486 399 aa15.13■□□□□ 0.01
RET-201ENST00000340058 TRUB2O95900 331 aaKnown RBP15.13■□□□□ 0.01
RET-201ENST00000340058 PIRTP0C851 137 aa15.13■□□□□ 0.01
RET-201ENST00000340058 GBE1Q04446 702 aa15.13■□□□□ 0.01
RET-201ENST00000340058 RNF157Q96PX1 679 aa15.13■□□□□ 0.01
RET-201ENST00000340058 APBA2Q99767 749 aa15.13■□□□□ 0.01
RET-201ENST00000340058 COLEC11Q9BWP8 271 aa15.13■□□□□ 0.01
RET-201ENST00000340058 OR12D3Q9UGF7 316 aa15.13■□□□□ 0.01
RET-201ENST00000340058 SMIM28A0A1B0GU29 152 aa15.12■□□□□ 0.01
RET-201ENST00000340058 TCF4P15884 667 aa15.12■□□□□ 0.01
RET-201ENST00000340058 SP100P23497 879 aaPredicted RBP15.12■□□□□ 0.01
RET-201ENST00000340058 SERPINB5P36952 375 aa15.12■□□□□ 0.01
RET-201ENST00000340058 ATXN1P54253 815 aaKnown RBP15.12■□□□□ 0.01
RET-201ENST00000340058 CDH18Q13634 790 aa15.12■□□□□ 0.01
RET-201ENST00000340058 ILDR2Q71H61 639 aa15.12■□□□□ 0.01
RET-201ENST00000340058 ZCCHC9Q8N567 271 aaKnown RBP15.12■□□□□ 0.01
RET-201ENST00000340058 SRPK1Q96SB4 655 aaKnown RBP15.12■□□□□ 0.01
RET-201ENST00000340058 YIPF3Q9GZM5 350 aa15.12■□□□□ 0.01
RET-201ENST00000340058 TRIM17Q9Y577 477 aa15.12■□□□□ 0.01
RET-201ENST00000340058 KIAA0100Q14667 2235 aaKnown RBP15.12■□□□□ 0.01
RET-201ENST00000340058 A0A1W2PPM1 405 aa15.12■□□□□ 0.01
RET-201ENST00000340058 GLTPD2A6NH11 291 aa15.12■□□□□ 0.01
RET-201ENST00000340058 TTLL13PA6NNM8 815 aa15.12■□□□□ 0.01
RET-201ENST00000340058 STX7O15400 261 aaKnown RBP15.12■□□□□ 0.01
RET-201ENST00000340058 LRCH4O75427 683 aa15.12■□□□□ 0.01
RET-201ENST00000340058 RHOBTB1O94844 696 aa15.12■□□□□ 0.01
RET-201ENST00000340058 CREB1P16220 341 aa15.12■□□□□ 0.01
RET-201ENST00000340058 SMPD1P17405 629 aa15.12■□□□□ 0.01
RET-201ENST00000340058 PPARGP37231 505 aaPredicted RBP15.12■□□□□ 0.01
RET-201ENST00000340058 SPDYAQ5MJ70 313 aa15.12■□□□□ 0.01
RET-201ENST00000340058 N4BP2L1Q5TBK1 243 aaPredicted RBP15.12■□□□□ 0.01
RET-201ENST00000340058 PMF1Q6P1K2 205 aa15.12■□□□□ 0.01
RET-201ENST00000340058 FOXR2Q6PJQ5 311 aa15.12■□□□□ 0.01
RET-201ENST00000340058 DDX53Q86TM3 631 aaKnown RBP15.12■□□□□ 0.01
RET-201ENST00000340058 EXOC3L1Q86VI1 746 aa15.12■□□□□ 0.01
RET-201ENST00000340058 ICA1LQ8NDH6 482 aa15.12■□□□□ 0.01
RET-201ENST00000340058 NMRK2Q9NPI5 230 aa15.12■□□□□ 0.01
RET-201ENST00000340058 TRPV2Q9Y5S1 764 aa15.12■□□□□ 0.01
RET-201ENST00000340058 ANXA9O76027 345 aa15.12■□□□□ 0.01
RET-201ENST00000340058 LUC7L3O95232 432 aaKnown RBP15.12■□□□□ 0.01
RET-201ENST00000340058 SERPINB4P48594 390 aa15.12■□□□□ 0.01
RET-201ENST00000340058 CAPRIN1Q14444 709 aaKnown RBP15.12■□□□□ 0.01
RET-201ENST00000340058 SLC10A6Q3KNW5 377 aa15.12■□□□□ 0.01
RET-201ENST00000340058 RNF148Q8N7C7 305 aa15.12■□□□□ 0.01
RET-201ENST00000340058 MAGEB18Q96M61 343 aa15.12■□□□□ 0.01
RET-201ENST00000340058 DMAP1Q9NPF5 467 aaPredicted RBP15.12■□□□□ 0.01
RET-201ENST00000340058 SETD1AO15047 1707 aaKnown RBP15.12■□□□□ 0.01
RET-201ENST00000340058 TRDMT1O14717 391 aaKnown RBP15.11■□□□□ 0.01
RET-201ENST00000340058 MTSS1O43312 755 aa15.11■□□□□ 0.01
RET-201ENST00000340058 LCA5LO95447 670 aa15.11■□□□□ 0.01
RET-201ENST00000340058 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
RET-201ENST00000340058 NPR3P17342 541 aa15.11■□□□□ 0.01
RET-201ENST00000340058 ANKRD20A8PQ5CZ79 823 aa15.11■□□□□ 0.01
RET-201ENST00000340058 TXNRD3NBQ6F5E7 133 aa15.11■□□□□ 0.01
RET-201ENST00000340058 PTRHD1Q6GMV3 140 aaKnown RBP15.11■□□□□ 0.01
RET-201ENST00000340058 POLNQ7Z5Q5 900 aa15.11■□□□□ 0.01
RET-201ENST00000340058 DPEP3Q9H4B8 488 aa15.11■□□□□ 0.01
RET-201ENST00000340058 ACSS2Q9NR19 701 aa15.11■□□□□ 0.01
RET-201ENST00000340058 SH3BP1Q9Y3L3 701 aa15.11■□□□□ 0.01
RET-201ENST00000340058 SLC4A7Q9Y6M7 1214 aa15.11■□□□□ 0.01
RET-201ENST00000340058 C5P01031 1676 aa15.11■□□□□ 0.01
RET-201ENST00000340058 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.11■□□□□ 0.01
RET-201ENST00000340058 BTNL10A8MVZ5 291 aa15.11■□□□□ 0.01
RET-201ENST00000340058 MBL2P11226 248 aaPredicted RBP15.11■□□□□ 0.01
RET-201ENST00000340058 ITGB6P18564 788 aa15.11■□□□□ 0.01
RET-201ENST00000340058 ZNF177Q13360 481 aaPredicted RBP15.11■□□□□ 0.01
RET-201ENST00000340058 SNX17Q15036 470 aa15.11■□□□□ 0.01
RET-201ENST00000340058 CCL14Q16627 93 aa15.11■□□□□ 0.01
RET-201ENST00000340058 SLC39A4Q6P5W5 647 aa15.11■□□□□ 0.01
RET-201ENST00000340058 WNT8BQ93098 351 aa15.11■□□□□ 0.01
RET-201ENST00000340058 PGM2Q96G03 612 aa15.11■□□□□ 0.01
RET-201ENST00000340058 TEPSINQ96N21 525 aa15.11■□□□□ 0.01
RET-201ENST00000340058 PDZD7Q9H5P4 517 aa15.11■□□□□ 0.01
RET-201ENST00000340058 POPDC2Q9HBU9 364 aa15.11■□□□□ 0.01
RET-201ENST00000340058 NOD2Q9HC29 1040 aa15.11■□□□□ 0.01
RET-201ENST00000340058 PRR23AA6NEV1 266 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms