RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 TBX4P57082 545 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 ODF2Q5BJF6 829 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 MSANTD2Q6P1R3 559 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 KLHDC10Q6PID8 442 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 SLFN11Q7Z7L1 901 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 FAM131BQ86XD5 332 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 SLC22A12Q96S37 553 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 TASP1Q9H6P5 420 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 GKN1Q9NS71 199 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 SMPD4Q9NXE4 827 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 PACSIN2Q9UNF0 486 aaPredicted RBP15.35■□□□□ 0.05
CSRP1-201ENST00000340006 NRG2O14511 850 aaPredicted RBP15.35■□□□□ 0.05
CSRP1-201ENST00000340006 MOSPD3O75425 235 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 ENDOD1O94919 500 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 PAPLNO95428 1278 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 ATP1A1P05023 1023 aaKnown RBP15.35■□□□□ 0.05
CSRP1-201ENST00000340006 KCNA5P22460 613 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 CCR1P32246 355 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 MAN1A1P33908 653 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 DNA2P51530 1060 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 ARL13BQ3SXY8 428 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 ZC3H12AQ5D1E8 599 aaKnown RBP15.35■□□□□ 0.05
CSRP1-201ENST00000340006 NT5DC3Q86UY8 548 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 ARFGAP1Q8N6T3 406 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 PGAP3Q96FM1 320 aaPredicted RBP15.35■□□□□ 0.05
CSRP1-201ENST00000340006 SLC12A6Q9UHW9 1150 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 CD207Q9UJ71 328 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 TLR6Q9Y2C9 796 aa15.35■□□□□ 0.05
CSRP1-201ENST00000340006 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.35■□□□□ 0.05
CSRP1-201ENST00000340006 PRUNE2Q8WUY3 3088 aa15.34■□□□□ 0.05
CSRP1-201ENST00000340006 IRF1P10914 325 aa15.34■□□□□ 0.05
CSRP1-201ENST00000340006 SLC2A3P11169 496 aa15.34■□□□□ 0.05
CSRP1-201ENST00000340006 CEBPBP17676 345 aa15.34■□□□□ 0.05
CSRP1-201ENST00000340006 PCK1P35558 622 aa15.34■□□□□ 0.05
CSRP1-201ENST00000340006 MTHFRP42898 656 aa15.34■□□□□ 0.05
CSRP1-201ENST00000340006 GET4Q7L5D6 327 aaPredicted RBP15.34■□□□□ 0.05
CSRP1-201ENST00000340006 RHOT1Q8IXI2 618 aa15.34■□□□□ 0.05
CSRP1-201ENST00000340006 CMTM8Q8IZV2 173 aa15.34■□□□□ 0.05
CSRP1-201ENST00000340006 MSLNLQ96KJ4 702 aa15.34■□□□□ 0.05
CSRP1-201ENST00000340006 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.34■□□□□ 0.05
CSRP1-201ENST00000340006 IRAK2O43187 625 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 TCF4P15884 667 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 PFKLP17858 780 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 HARS2P49590 506 aaKnown RBP15.33■□□□□ 0.05
CSRP1-201ENST00000340006 RPS6KA1Q15418 735 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 TRIP4Q15650 581 aaPredicted RBP15.33■□□□□ 0.05
CSRP1-201ENST00000340006 KCNT1Q5JUK3 1230 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 ERMARDQ5T6L9 678 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 UBL4BQ8N7F7 174 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 HSPH1Q92598 858 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 ZSWIM3Q96MP5 696 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 TKTL2Q9H0I9 626 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 SMG9Q9H0W8 520 aaKnown RBP15.33■□□□□ 0.05
CSRP1-201ENST00000340006 TMEM51Q9NW97 253 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 ZMYM5Q9UJ78 669 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 HBS1LQ9Y450 684 aaKnown RBP15.33■□□□□ 0.05
CSRP1-201ENST00000340006 CPQQ9Y646 472 aa15.33■□□□□ 0.05
CSRP1-201ENST00000340006 CLUHO75153 1309 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 SPTBN5Q9NRC6 3674 aaKnown RBP15.33■□□□□ 0.04
CSRP1-201ENST00000340006 SOBPA7XYQ1 873 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 MOCS2O96007 188 aaPredicted RBP15.33■□□□□ 0.04
CSRP1-201ENST00000340006 IGLV3-25P01717 112 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 APOEP02649 317 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 KRT7P08729 469 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 CXCR3P49682 368 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 TAS2R40P59535 323 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 COL19A1Q14993 1142 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 SMTNL2Q2TAL5 461 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 ATP13A4Q4VNC1 1196 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 BOLA3Q53S33 107 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 MEI1Q5TIA1 1274 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 OTUD1Q5VV17 481 aaPredicted RBP15.33■□□□□ 0.04
CSRP1-201ENST00000340006 PAPD7Q5XG87 772 aaKnown RBP15.33■□□□□ 0.04
CSRP1-201ENST00000340006 UNC45BQ8IWX7 931 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 FGF13Q92913 245 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 HLA-CQ95604 372 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 KLF16Q9BXK1 252 aaPredicted RBP15.33■□□□□ 0.04
CSRP1-201ENST00000340006 UBE2ZQ9H832 354 aaPredicted RBP15.33■□□□□ 0.04
CSRP1-201ENST00000340006 TDP1Q9NUW8 608 aa15.33■□□□□ 0.04
CSRP1-201ENST00000340006 GBP2P32456 591 aaPredicted RBP15.32■□□□□ 0.04
CSRP1-201ENST00000340006 ADRA1BP35368 520 aa15.32■□□□□ 0.04
CSRP1-201ENST00000340006 KCNQ1P51787 676 aa15.32■□□□□ 0.04
CSRP1-201ENST00000340006 BNIPLQ7Z465 357 aa15.32■□□□□ 0.04
CSRP1-201ENST00000340006 ARID3BQ8IVW6 561 aaPredicted RBP15.32■□□□□ 0.04
CSRP1-201ENST00000340006 CCDC185Q8N715 623 aa15.32■□□□□ 0.04
CSRP1-201ENST00000340006 KCTD6Q8NC69 237 aa15.32■□□□□ 0.04
CSRP1-201ENST00000340006 SMRP1Q8NCR6 262 aa15.32■□□□□ 0.04
CSRP1-201ENST00000340006 ZSCAN18Q8TBC5 510 aaPredicted RBP15.32■□□□□ 0.04
CSRP1-201ENST00000340006 SIK2Q9H0K1 926 aa15.32■□□□□ 0.04
CSRP1-201ENST00000340006 L2HGDHQ9H9P8 463 aa15.32■□□□□ 0.04
CSRP1-201ENST00000340006 BRWD1Q9NSI6 2320 aa15.32■□□□□ 0.04
CSRP1-201ENST00000340006 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.31■□□□□ 0.04
CSRP1-201ENST00000340006 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 MIF4GDA9UHW6 222 aaKnown RBP15.31■□□□□ 0.04
CSRP1-201ENST00000340006 IL1R2P27930 398 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 SLC7A9P82251 487 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 AMPD2Q01433 879 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 NNTQ13423 1086 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 PPP2R5DQ14738 602 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 BRMS1LQ5PSV4 323 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms