RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 HSDL1Q3SXM5 330 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 NXNQ6DKJ4 435 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 ATG14Q6ZNE5 492 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 OR6Y1Q8NGX8 325 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 PPCSQ9HAB8 311 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 CNTN6Q9UQ52 1028 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 A0A088AWK7 358 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 SPATA31C2B4DYI2 1134 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 LCP1P13796 627 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 BACE1P56817 501 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 MED21Q13503 144 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 TRMT5Q32P41 509 aaKnown RBP16.66■□□□□ 0.26
SCARB1-202ENST00000339570 IYDQ6PHW0 289 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 RNF111Q6ZNA4 994 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 NME8Q8N427 588 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 CMASQ8NFW8 434 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-202ENST00000339570 GMLQ99445 158 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 DDX18Q9NVP1 670 aaKnown RBP16.66■□□□□ 0.26
SCARB1-202ENST00000339570 SIX4Q9UIU6 781 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 PCDHGB4Q9UN71 923 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 PCDHGB5Q9Y5G0 923 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 STYXL1Q9Y6J8 313 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 PLSCR1O15162 318 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 ADCY6O43306 1168 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 PDGFRBP09619 1106 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 MGAT1P26572 445 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 COPAP53621 1224 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 PKNOX1P55347 436 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 TFDP2Q14188 446 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 DLG2Q15700 870 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 KCNT2Q6UVM3 1135 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 SDCCAG8Q86SQ7 713 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-202ENST00000339570 MFN1Q8IWA4 741 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 TMEM176AQ96HP8 235 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 CCDC106Q9BWC9 280 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 UBE2OQ9C0C9 1292 aaKnown RBP16.65■□□□□ 0.26
SCARB1-202ENST00000339570 TGDSO95455 350 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 ADORA2BP29275 332 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 TYK2P29597 1187 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 GLRA4Q5JXX5 417 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 NET1Q7Z628 596 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-202ENST00000339570 PQLC3Q8N755 202 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 RDM1Q8NG50 284 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 PPP4R1Q8TF05 950 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 A8MXQ7 604 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 SIN3BO75182 1162 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 AMHP03971 560 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 PYGLP06737 847 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 SLC10A2Q12908 348 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-202ENST00000339570 GOLGA7BQ2TAP0 167 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 ANGEL2Q5VTE6 544 aaKnown RBP16.65■□□□□ 0.26
SCARB1-202ENST00000339570 TEX13BQ9BXU2 312 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 ZNF518BQ9C0D4 1074 aa16.65■□□□□ 0.26
SCARB1-202ENST00000339570 WDR55Q9H6Y2 383 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-202ENST00000339570 LRRC37AA6NMS7 1700 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 CYP2F1P24903 491 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 SDC4P31431 198 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 RABGGTBP53611 331 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 C11orf91Q3C1V1 193 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 SPDYAQ5MJ70 313 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 PDPK2PQ6A1A2 396 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 SESTD1Q86VW0 696 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 MAP7D3Q8IWC1 876 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 UBR7Q8N806 425 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.64■□□□□ 0.258e-8■□□□□ 9.4
SCARB1-202ENST00000339570 NIPA2Q8N8Q9 360 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-202ENST00000339570 GPR25O00155 361 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 CREB3O43889 395 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 CYP3A5P20815 502 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 GLRBP48167 497 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 DNAL1Q4LDG9 190 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 TEX44Q53QW1 395 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 PPM1LQ5SGD2 360 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 FAM219BQ5XKK7 198 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 PMF1Q6P1K2 205 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 FRMD7Q6ZUT3 714 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 DHDDSQ86SQ9 333 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 FAM131BQ86XD5 332 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 TP53INP2Q8IXH6 220 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 ZNF280CQ8ND82 737 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 FAM156AQ8NDB6 213 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 PIWIL2Q8TC59 973 aaKnown RBP16.64■□□□□ 0.25
SCARB1-202ENST00000339570 CNKSR2Q8WXI2 1034 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 FAM149B1Q96BN6 582 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 CDHR1Q96JP9 859 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 CNBD2Q96M20 576 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 EPAS1Q99814 870 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 CXCL16Q9H2A7 254 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 PCDH18Q9HCL0 1135 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 S100A14Q9HCY8 104 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 TMEM216Q9P0N5 145 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 HACL1Q9UJ83 578 aa16.64■□□□□ 0.25
SCARB1-202ENST00000339570 CPSF3Q9UKF6 684 aaKnown RBP16.64■□□□□ 0.25
SCARB1-202ENST00000339570 MAFBQ9Y5Q3 323 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-202ENST00000339570 PEX1O43933 1283 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 IQCF3P0C7M6 154 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 TMEM62Q0P6H9 643 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 TBL3Q12788 808 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms