RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 CFAP69A5D8W1 941 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 KCNN4O15554 427 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 DAB1O75553 588 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 B3GAT3O94766 335 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 CPP00450 1065 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 ODC1P11926 461 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 ZFXP17010 805 aaPredicted RBP11.49□□□□□ -0.57
LRP1-202ENST00000338962 PCSK1P29120 753 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 L1CAMP32004 1257 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 NOS2P35228 1153 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 TKTL1P51854 596 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 DEFB103AP81534 67 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 ANKRD22Q5VYY1 191 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 EXOC3L1Q86VI1 746 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 FAM131BQ86XD5 332 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 RIBC1Q8N443 379 aaPredicted RBP11.49□□□□□ -0.57
LRP1-202ENST00000338962 CCDC185Q8N715 623 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 NDRG1Q92597 394 aaKnown RBP11.49□□□□□ -0.57
LRP1-202ENST00000338962 CENPTQ96BT3 561 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 SLC9A7Q96T83 725 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 INTS9Q9NV88 658 aaKnown RBP11.49□□□□□ -0.57
LRP1-202ENST00000338962 TBK1Q9UHD2 729 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 XPO7Q9UIA9 1087 aaKnown RBP11.49□□□□□ -0.57
LRP1-202ENST00000338962 SLC4A7Q9Y6M7 1214 aa11.49□□□□□ -0.57
LRP1-202ENST00000338962 ATXN2Q99700 1313 aaKnown RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 MYBPHLA2RUH7 354 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 AP1G2O75843 785 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 MAP3K6O95382 1288 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 ARL4AP40617 200 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 NDUFV1P49821 464 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 NRLP54845 237 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 TIGD5Q53EQ6 642 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 CAPN12Q6ZSI9 719 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 TADA2BQ86TJ2 420 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 FAM35AQ86V20 835 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 ZNF473Q8WTR7 871 aaKnown RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 PYROXD1Q8WU10 500 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 XPO6Q96QU8 1125 aaKnown RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 POPDC2Q9HBU9 364 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 PAK5Q9P286 719 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 LGALS13Q9UHV8 139 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 CDH9Q9ULB4 789 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 INPP5FQ9Y2H2 1132 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 BCLAF3A2AJT9 711 aaKnown RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 CAPN9O14815 690 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 HOXA2O43364 376 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 DGKIO75912 1065 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 KIAA0754O94854 1291 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 TMEM63AO94886 807 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 FBXO21O94952 628 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 GJB5O95377 273 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 PHBP35232 272 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 NR2C2P49116 596 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 GAD2Q05329 585 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 RNASELQ05823 741 aaKnown RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 GRIK3Q13003 919 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 PAN2Q504Q3 1202 aaKnown RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 METTL23Q86XA0 190 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 ANKMY2Q8IV38 441 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 CDKL3Q8IVW4 592 aaPredicted RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 CCDC13Q8IYE1 715 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 ATP11CQ8NB49 1132 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 ZNF689Q96CS4 500 aaPredicted RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 SMARCD1Q96GM5 515 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 CSPG4P5Q96PW8 444 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 RC3H2Q9HBD1 1191 aaKnown RBP11.48□□□□□ -0.57
LRP1-202ENST00000338962 RAB6BQ9NRW1 208 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 NAALADL1Q9UQQ1 740 aa11.48□□□□□ -0.57
LRP1-202ENST00000338962 TNRC18O15417 2968 aaPredicted RBP11.47□□□□□ -0.57
LRP1-202ENST00000338962 SYNJ2BP-COX16A0A087WUM0 186 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 TCRBV7S3A2A0A539 114 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 I3L4J1 428 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 M0QYT0 321 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 BANF1O75531 89 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 RBL1P28749 1068 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 HTRA4P83105 476 aaPredicted RBP11.47□□□□□ -0.57
LRP1-202ENST00000338962 CLLU1OSQ5K130 101 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 FNBP1LQ5T0N5 605 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 PPP1R21Q6ZMI0 780 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 PSTKQ8IV42 348 aaKnown RBP11.47□□□□□ -0.57
LRP1-202ENST00000338962 NT5C3BQ969T7 300 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 RTP4Q96DX8 246 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 KCTD15Q96SI1 283 aaPredicted RBP11.47□□□□□ -0.57
LRP1-202ENST00000338962 USP29Q9HBJ7 922 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 CNGB3Q9NQW8 809 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 MTMR10Q9NXD2 777 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 COX16Q9P0S2 106 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 LRFN2Q9ULH4 789 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 TMEM120BA0PK00 339 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 E7ESA3 106 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 POC1B-GALNT4F8VUJ3 575 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 CHADO15335 359 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 KIF1CO43896 1103 aaKnown RBP11.47□□□□□ -0.57
LRP1-202ENST00000338962 ATP2A2P16615 1042 aaKnown RBP11.47□□□□□ -0.57
LRP1-202ENST00000338962 GOT1P17174 413 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 GBE1Q04446 702 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 NME3Q13232 169 aa11.47□□□□□ -0.57
LRP1-202ENST00000338962 TUSC3Q13454 348 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms