RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 DESP17661 470 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 GPD1P21695 349 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 IL1R2P27930 398 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 PTPN4P29074 926 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 RPA3P35244 121 aaPredicted RBP11.18□□□□□ -0.62
RTN3-201ENST00000338850 GPD2P43304 727 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 EIF3EP60228 445 aaKnown RBP11.18□□□□□ -0.62
RTN3-201ENST00000338850 IGBP1P78318 339 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 ROR1Q01973 937 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 MBTD1Q05BQ5 628 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 DNAJC3Q13217 504 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 SLC1A5Q15758 541 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 KCTD19Q17RG1 926 aaPredicted RBP11.18□□□□□ -0.62
RTN3-201ENST00000338850 BOLA3Q53S33 107 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 ZNF484Q5JVG2 852 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 ZFYVE27Q5T4F4 411 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 TXNRD3NBQ6F5E7 133 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 LVRNQ6Q4G3 990 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 LCLAT1Q6UWP7 414 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 NLRP9Q7RTR0 991 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 OTOAQ7RTW8 1153 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 MAP7D3Q8IWC1 876 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.18□□□□□ -0.62
RTN3-201ENST00000338850 RNF149Q8NC42 400 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 STK32AQ8WU08 396 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 ELMO3Q96BJ8 720 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 SLC7A6OSQ96CW6 309 aaPredicted RBP11.18□□□□□ -0.62
RTN3-201ENST00000338850 MTBPQ96DY7 904 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 FAM84AQ96KN4 292 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 WDR83Q9BRX9 315 aaKnown RBP11.18□□□□□ -0.62
RTN3-201ENST00000338850 ZNF670Q9BS34 389 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 TCHPQ9BT92 498 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 MAK16Q9BXY0 300 aaKnown RBP11.18□□□□□ -0.62
RTN3-201ENST00000338850 FAM49AQ9H0Q0 323 aaPredicted RBP11.18□□□□□ -0.62
RTN3-201ENST00000338850 RNPEPL1Q9HAU8 725 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 ETNK1Q9HBU6 452 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 KLHL11Q9NVR0 708 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 SIX4Q9UIU6 781 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 ITGA11Q9UKX5 1188 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 USP18Q9UMW8 372 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 MTO1Q9Y2Z2 717 aaKnown RBP11.18□□□□□ -0.62
RTN3-201ENST00000338850 DERAQ9Y315 318 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 CDY2AQ9Y6F7 541 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 EVPLQ92817 2033 aa11.18□□□□□ -0.62
RTN3-201ENST00000338850 C2CD4BA6NLJ0 364 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 ENPP3O14638 875 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 C1QAP02745 245 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 RPLP2P05387 115 aaKnown RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 RBP3P10745 1247 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 KRT4P19013 534 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 TPSB2P20231 275 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 PRKCHP24723 683 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 CNTFP26441 200 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 MIPP30301 263 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 MAGEA3P43357 314 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 PHKA2P46019 1235 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 MRPS6P82932 125 aaKnown RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 TFAMQ00059 246 aaKnown RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 NAB1Q13506 487 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 DPYSL3Q14195 570 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 LLGL1Q15334 1064 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 TPSAB1Q15661 275 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 TBCCQ15814 346 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 CTC1Q2NKJ3 1217 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 STXBP5Q5T5C0 1151 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 LGSNQ5TDP6 509 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 SLC9A4Q6AI14 798 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 ZNF449Q6P9G9 518 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 CYP4V2Q6ZWL3 525 aaPredicted RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 TRMT1LQ7Z2T5 733 aaKnown RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 PHLDB2Q86SQ0 1253 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 RHPN2Q8IUC4 686 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 PALM2Q8IXS6 379 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 TMEM192Q8IY95 271 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 FBXO36Q8NEA4 188 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 JOSD2Q8TAC2 188 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 TRAPPC12Q8WVT3 735 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 UTP4Q969X6 686 aaKnown RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 HAUS1Q96CS2 278 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 MRPL38Q96DV4 380 aaKnown RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 C7orf26Q96N11 449 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 TSPAN18Q96SJ8 248 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 CPXM1Q96SM3 734 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 TRIM55Q9BYV6 548 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 SDCBP2Q9H190 292 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 UBE2ZQ9H832 354 aaPredicted RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 AGO3Q9H9G7 860 aaKnown RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 RC3H2Q9HBD1 1191 aaKnown RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 MLXIPLQ9NP71 852 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 METTL5Q9NRN9 209 aaKnown RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 CYTH4Q9UIA0 394 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 GRID1Q9ULK0 1009 aa11.17□□□□□ -0.62
RTN3-201ENST00000338850 BARX2Q9UMQ3 279 aaPredicted RBP11.17□□□□□ -0.62
RTN3-201ENST00000338850 TCF20Q9UGU0 1960 aaKnown RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 FAM170AA1A519 330 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 H3BNC9 293 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 SPAG7O75391 227 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 MICAL2O94851 1124 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms