RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 NCBP2-AS2Q69YL0 99 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 MFSD5Q6N075 450 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 FUT10Q6P4F1 479 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 PRUNE1Q86TP1 453 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 ZC3H18Q86VM9 953 aaKnown RBP16.84■□□□□ 0.29
HPS1-202ENST00000338546 CPT1BQ92523 772 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 SCLYQ96I15 445 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 ZNF333Q96JL9 665 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 CEP295NLQ96MC4 621 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 OLFM3Q96PB7 478 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 QKIQ96PU8 341 aaKnown RBP eCLIP16.84■□□□□ 0.29
HPS1-202ENST00000338546 FERMT1Q9BQL6 677 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 CCDC77Q9BR77 488 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 ARHGEF4Q9NR80 690 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.84■□□□□ 0.29
HPS1-202ENST00000338546 NINJ2Q9NZG7 142 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 IL37Q9NZH6 218 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 SCML2Q9UQR0 700 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 TBKBP1A7MCY6 615 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 EEF2KO00418 725 aaKnown RBP16.83■□□□□ 0.28
HPS1-202ENST00000338546 TBC1D4O60343 1298 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 GCATO75600 419 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 DGKIO75912 1065 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 IVLP07476 585 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 TSHRP16473 764 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 MAGEA6P43360 314 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 GYS2P54840 703 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 ARL4CP56559 192 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 YWHAGP61981 247 aaKnown RBP eCLIP16.83■□□□□ 0.28
HPS1-202ENST00000338546 GPR17Q13304 367 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 DPYSQ14117 519 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 TCTN1Q2MV58 587 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 BRMS1LQ5PSV4 323 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 BTBD8Q5XKL5 378 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 RFX8Q6ZV50 586 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 ANKS3Q6ZW76 656 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 MON1AQ86VX9 555 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 NUP93Q8N1F7 819 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 SPPL2BQ8TCT7 592 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 TLCD1Q96CP7 247 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 SERPINB12Q96P63 405 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 BRD8Q9H0E9 1235 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 OSBPL2Q9H1P3 480 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 WDCPQ9H6R7 721 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 PPCSQ9HAB8 311 aa16.83■□□□□ 0.28
HPS1-202ENST00000338546 FNDC1Q4ZHG4 1894 aaPredicted RBP16.82■□□□□ 0.28
HPS1-202ENST00000338546 C5orf60A6NFR6 353 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 E7ESA3 106 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 RASGRF2O14827 1237 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 NCAM2O15394 837 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 KCNN4O15554 427 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 MYCP01106 439 aaPredicted RBP16.82■□□□□ 0.28
HPS1-202ENST00000338546 SHBGP04278 402 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 NR1D1P20393 614 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 AMPD1P23109 780 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 RABGGTBP53611 331 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 CCL23P55773 120 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 GBE1Q04446 702 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 STAT4Q14765 748 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 HIF1AQ16665 826 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 KYNUQ16719 465 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 FBXO46Q6PJ61 603 aaPredicted RBP16.82■□□□□ 0.28
HPS1-202ENST00000338546 DQX1Q8TE96 717 aaKnown RBP16.82■□□□□ 0.28
HPS1-202ENST00000338546 ZBTB9Q96C00 473 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 ARMC5Q96C12 935 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 GPR62Q9BZJ7 368 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 SMOC2Q9H3U7 446 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 ABI2Q9NYB9 513 aaPredicted RBP16.82■□□□□ 0.28
HPS1-202ENST00000338546 DTLQ9NZJ0 730 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.82■□□□□ 0.28
HPS1-202ENST00000338546 MICAL3Q7RTP6 2002 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 VWA8A3KMH1 1905 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 SCN5AQ14524 2016 aa16.82■□□□□ 0.28
HPS1-202ENST00000338546 FAM92AA1XBS5 289 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 DCLK1O15075 740 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 SHOX2O60902 331 aaPredicted RBP16.81■□□□□ 0.28
HPS1-202ENST00000338546 RTN3O95197 1032 aaPredicted RBP16.81■□□□□ 0.28
HPS1-202ENST00000338546 EFEMP2O95967 443 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 AGTP01019 485 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 RBL1P28749 1068 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 SLC10A2Q12908 348 aaPredicted RBP16.81■□□□□ 0.28
HPS1-202ENST00000338546 PDK1Q15118 436 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 TNFAIP8L3Q5GJ75 292 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 KCTD16Q68DU8 428 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 KCNT2Q6UVM3 1135 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
HPS1-202ENST00000338546 PYROXD2Q8N2H3 581 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 SCAMP5Q8TAC9 235 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 TFB1MQ8WVM0 346 aaKnown RBP16.81■□□□□ 0.28
HPS1-202ENST00000338546 SPATA17Q96L03 361 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 HAPLN3Q96S86 360 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 EPAS1Q99814 870 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 TTPALQ9BTX7 342 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 KLC2Q9H0B6 622 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 SAYSD1Q9NPB0 183 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 ARHGEF38Q9NXL2 777 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 SYNJ2BP-COX16A0A087WUM0 186 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 A0A087WUV0 522 aaPredicted RBP16.81■□□□□ 0.28
HPS1-202ENST00000338546 ABHD14A-ACY1A0A1B0GW23 586 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 PPP1R12AO14974 1030 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms