RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SCD5Q86SK9 330 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 SLC9A9Q8IVB4 645 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 CYFIP2Q96F07 1278 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 INTS4Q96HW7 963 aaKnown RBP12.07□□□□□ -0.48
CSMD2-202ENST00000338325 ZNF396Q96N95 335 aaPredicted RBP12.07□□□□□ -0.48
CSMD2-202ENST00000338325 TWNKQ96RR1 684 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 CDK5RAP1Q96SZ6 601 aaKnown RBP12.07□□□□□ -0.48
CSMD2-202ENST00000338325 CDC6Q99741 560 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 NUP58Q9BVL2 599 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 DCLK3Q9C098 648 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 DMAC2Q9NW81 257 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 CLIC5Q9NZA1 410 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 DKK4Q9UBT3 224 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 EIF2B4Q9UI10 523 aaKnown RBP12.07□□□□□ -0.48
CSMD2-202ENST00000338325 RASAL2Q9UJF2 1139 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 RAXQ9Y2V3 346 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 DKK1O94907 266 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 HLA-DRAP01903 254 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 PRKCHP24723 683 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 CORO1AP31146 461 aaKnown RBP12.06□□□□□ -0.48
CSMD2-202ENST00000338325 AFMP43652 599 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 COG7P83436 770 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 EIF4HQ15056 248 aaKnown RBP12.06□□□□□ -0.48
CSMD2-202ENST00000338325 DBX2Q6ZNG2 339 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 SV2AQ7L0J3 742 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 CACUL1Q86Y37 369 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 C1orf216Q8TAB5 229 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 TMC2Q8TDI7 906 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 TMEM174Q8WUU8 243 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 HNRNPLLQ8WVV9 542 aaKnown RBP12.06□□□□□ -0.48
CSMD2-202ENST00000338325 PIWIL1Q96J94 861 aaKnown RBP12.06□□□□□ -0.48
CSMD2-202ENST00000338325 NT5C1AQ9BXI3 368 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 PCED1AQ9H1Q7 454 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 ELOVL2Q9NXB9 296 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 TOR4AQ9NXH8 423 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 ACACAQ13085 2346 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
CSMD2-202ENST00000338325 A0A1B0GVT2 93 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 IKBKBO14920 756 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 KIF20AO95235 890 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 CYBBP04839 570 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 EPHX1P07099 455 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 HMBSP08397 361 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 ATXN1LP0C7T5 689 aaKnown RBP12.06□□□□□ -0.48
CSMD2-202ENST00000338325 EFEMP1Q12805 493 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 CPXM2Q8N436 756 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 RBBP8NLQ8NC74 664 aaPredicted RBP12.06□□□□□ -0.48
CSMD2-202ENST00000338325 RHBDD1Q8TEB9 315 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 SNX19Q92543 992 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 IMPG2Q9BZV3 1241 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 CIPCQ9C0C6 399 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 CYP3A43Q9HB55 503 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 AGO1Q9UL18 857 aaKnown RBP12.06□□□□□ -0.48
CSMD2-202ENST00000338325 USP3Q9Y6I4 520 aa12.06□□□□□ -0.48
CSMD2-202ENST00000338325 NUMA1Q14980 2115 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 APC2O95996 2303 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 NR3C1P04150 777 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 AFF3P51826 1226 aaKnown RBP12.05□□□□□ -0.48
CSMD2-202ENST00000338325 ARID5AQ03989 594 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 SUZ12Q15022 739 aaKnown RBP12.05□□□□□ -0.48
CSMD2-202ENST00000338325 SERPINA13PQ6UXR4 307 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 FAM124AQ86V42 546 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 DENND1CQ8IV53 801 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 GALNT15Q8N3T1 639 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 KIAA0895Q8NCT3 520 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 OR2T3Q8NH03 318 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 LRIG1Q96JA1 1093 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 DUSP16Q9BY84 665 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 SLC2A11Q9BYW1 496 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 DNAI2Q9GZS0 605 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 KCTD10Q9H3F6 313 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 EXOC1Q9NV70 894 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 FAM13BQ9NYF5 915 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 CLEC4EQ9ULY5 219 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 PLXNA2O75051 1894 aa12.05□□□□□ -0.48
CSMD2-202ENST00000338325 GOLGA8CPA6NN73 597 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 PDXKO00764 312 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 KLRC4O43908 158 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 CD58P19256 250 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 CSNK1EP49674 416 aaKnown RBP12.04□□□□□ -0.48
CSMD2-202ENST00000338325 STK4Q13043 487 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 CAMK2GQ13555 558 aaPredicted RBP12.04□□□□□ -0.48
CSMD2-202ENST00000338325 TEAD4Q15561 434 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 C1orf220Q5T0J3 134 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 PPP1R26Q5T8A7 1209 aaPredicted RBP12.04□□□□□ -0.48
CSMD2-202ENST00000338325 CEP135Q66GS9 1140 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 TMEM215Q68D42 235 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 GRAMD1CQ8IYS0 662 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 ARHGAP18Q8N392 663 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 DDI1Q8WTU0 396 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 SORCS1Q8WY21 1168 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 NIF3L1Q9GZT8 377 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 LHX5Q9H2C1 402 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 APOBEC3GQ9HC16 384 aaKnown RBP12.04□□□□□ -0.48
CSMD2-202ENST00000338325 MARCH2Q9P0N8 246 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 STRIP2Q9ULQ0 834 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 BTBD3Q9Y2F9 522 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms