RNA–Protein interactions for RNA: ENST00000337959.8

PACSIN2-202, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 5 BASIC

Gene PACSIN2, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-202ENST00000337959 CFAP36Q96G28 342 aa13.67□□□□□ -0.22
PACSIN2-202ENST00000337959 SRPK1Q96SB4 655 aaKnown RBP13.67□□□□□ -0.22
PACSIN2-202ENST00000337959 MRPL47Q9HD33 250 aaKnown RBP13.67□□□□□ -0.22
PACSIN2-202ENST00000337959 SOX13Q9UN79 622 aa13.67□□□□□ -0.22
PACSIN2-202ENST00000337959 FAF1Q9UNN5 650 aaPredicted RBP13.67□□□□□ -0.22
PACSIN2-202ENST00000337959 LZTS1Q9Y250 596 aa13.67□□□□□ -0.22
PACSIN2-202ENST00000337959 DRG1Q9Y295 367 aaKnown RBP13.67□□□□□ -0.22
PACSIN2-202ENST00000337959 TCRBV7S3A2A0A539 114 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 TRIM49D1C9J1S8 452 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 RPL7AP62424 266 aaKnown RBP13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 CBX3Q13185 183 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 SMAD1Q15797 465 aaKnown RBP13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 SMTNL2Q2TAL5 461 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 ZNF280DQ6N043 979 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 TRIM72Q6ZMU5 477 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 E2F7Q96AV8 911 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 VCPIP1Q96JH7 1222 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 AGAP3Q96P47 875 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 SIKE1Q9BRV8 207 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 MRPL1Q9BYD6 325 aaKnown RBP13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 TMEM98Q9Y2Y6 226 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 AK5Q9Y6K8 562 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 BOLA2-SMG1P6H3BVE0 249 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 ITGB5P18084 799 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 GDF10P55107 478 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 TMEM259Q4ZIN3 620 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 TXNRD3NBQ6F5E7 133 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 HAUS6Q7Z4H7 955 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 CHSY1Q86X52 802 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 HPS6Q86YV9 775 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 CRLF3Q8IUI8 442 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 PDIK1LQ8N165 341 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 RAB3IL1Q8TBN0 382 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 DCAKDQ8WVC6 231 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 RSAD2Q8WXG1 361 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 APOPT1Q96IL0 206 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 ACSS3Q9H6R3 686 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 LIN28AQ9H9Z2 209 aaKnown RBP13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 USP29Q9HBJ7 922 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 PTTG2Q9NZH5 202 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 INPP5FQ9Y2H2 1132 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 SCINQ9Y6U3 715 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 LRRC37A2A6NM11 1700 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 ADCY6O43306 1168 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 ARP10275 920 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 PCSK6P29122 969 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 RPS6P62753 249 aaKnown RBP13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 ANKRD20A4Q4UJ75 823 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 MON1BQ7L1V2 547 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 GALNT4Q8N4A0 578 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 SENP7Q9BQF6 1050 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 POLIQ9UNA4 740 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 PLA2G4CQ9UP65 541 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 DTNAQ9Y4J8 743 aa13.66□□□□□ -0.22
PACSIN2-202ENST00000337959 A0A088AWK7 358 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 VILLO15195 856 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 TSHRP16473 764 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 ADCYAP1R1P41586 468 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 NCKAP1LP55160 1127 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 GK3PQ14409 553 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 CYTH1Q15438 398 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 CNGA3Q16281 694 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 SPOPLQ6IQ16 392 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 DCUN1D2Q6PH85 259 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 PCGF5Q86SE9 256 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 RCOR2Q8IZ40 523 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 DHRS1Q96LJ7 313 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 DHRS4Q9BTZ2 278 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 ABHD16BQ9H3Z7 469 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 IFT122Q9HBG6 1241 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 DNAJB4Q9UDY4 337 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 XPO7Q9UIA9 1087 aaKnown RBP13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 AVILO75366 819 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 E2F6O75461 281 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 TOP3BO95985 862 aaKnown RBP13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 CCDC166P0CW27 439 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 CDK4P11802 303 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 NCF2P19878 526 aaPredicted RBP13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 PTPN7P35236 360 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 ELK3P41970 407 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 RPL5P46777 297 aaKnown RBP13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 BAATQ14032 418 aaPredicted RBP13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 KCNT1Q5JUK3 1230 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 TMCO4Q5TGY1 634 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 ZFP28Q8NHY6 868 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 KATNBL1Q9H079 304 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 PRO3102Q9H379 93 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 PCDH9Q9HC56 1237 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 KCNK4Q9NYG8 393 aa13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 LAMA2P24043 3122 aaKnown RBP13.65□□□□□ -0.22
PACSIN2-202ENST00000337959 CAPN14A8MX76 684 aa13.64□□□□□ -0.23
PACSIN2-202ENST00000337959 F8VP50 259 aa13.64□□□□□ -0.23
PACSIN2-202ENST00000337959 IPO5O00410 1097 aaKnown RBP13.64□□□□□ -0.23
PACSIN2-202ENST00000337959 LYPLA2O95372 231 aa13.64□□□□□ -0.23
PACSIN2-202ENST00000337959 P4HBP07237 508 aaKnown RBP13.64□□□□□ -0.23
PACSIN2-202ENST00000337959 MSX2P35548 267 aaPredicted RBP13.64□□□□□ -0.23
PACSIN2-202ENST00000337959 PSMC5P62195 406 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms