RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 Q6ZNB5 142 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 TOGARAM2Q6ZUX3 1019 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 DENND1CQ8IV53 801 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 RGL4Q8IZJ4 473 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 FMR1NBQ8N0W7 255 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-202ENST00000337571 SIX6OS1Q8N1H7 587 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 HDDC3Q8N4P3 179 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 DDI1Q8WTU0 396 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ERLEC1Q96DZ1 483 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ACOX2Q99424 681 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ARID3AQ99856 593 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 METTL14Q9HCE5 456 aaKnown RBP11.17□□□□□ -0.62
CAPN3-202ENST00000337571 OLA1Q9NTK5 396 aaKnown RBP11.17□□□□□ -0.62
CAPN3-202ENST00000337571 TMEM74BQ9NUR3 256 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 CACNA2D2Q9NY47 1150 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 PILRBQ9UKJ0 227 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 SLC6A14Q9UN76 642 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 NCOR2Q9Y618 2525 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 PLXND1Q9Y4D7 1925 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 CDX4O14627 284 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-202ENST00000337571 PSMA7O14818 248 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 XPO1O14980 1071 aaKnown RBP11.16□□□□□ -0.62
CAPN3-202ENST00000337571 TIMM44O43615 452 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 SYNCRIPO60506 623 aaKnown RBP11.16□□□□□ -0.62
CAPN3-202ENST00000337571 KLKB1P03952 638 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 VDRP11473 427 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 GNSP15586 552 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 ENGP17813 658 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 NDUFV2P19404 249 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 CSRP1P21291 193 aaKnown RBP11.16□□□□□ -0.62
CAPN3-202ENST00000337571 PMLP29590 882 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 PPP1R2P41236 205 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 BCAT1P54687 386 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 SHC2P98077 582 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 BST2Q10589 180 aaKnown RBP11.16□□□□□ -0.62
CAPN3-202ENST00000337571 LRMPQ12912 555 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 GOLGA7BQ2TAP0 167 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 CBWD6Q4V339 395 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 MPPE1Q53F39 396 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 COBLL1Q53SF7 1204 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 RAB41Q5JT25 222 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 CBWD3Q5JTY5 395 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 CBWD5Q5RIA9 395 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 PM20D1Q6GTS8 502 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 KIAA1211LQ6NV74 962 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 KIAA1324Q6UXG2 1013 aaKnown RBP11.16□□□□□ -0.62
CAPN3-202ENST00000337571 PLD4Q96BZ4 506 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 TIGD1Q96MW7 591 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 GABRG3Q99928 467 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 GTPBP2Q9BX10 602 aaKnown RBP11.16□□□□□ -0.62
CAPN3-202ENST00000337571 PRDM16Q9HAZ2 1276 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 TSPAN16Q9UKR8 245 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 AGO1Q9UL18 857 aaKnown RBP11.16□□□□□ -0.62
CAPN3-202ENST00000337571 CYP8B1Q9UNU6 501 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 SLC27A6Q9Y2P4 619 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 COQ4Q9Y3A0 265 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 RAD54BQ9Y620 910 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 STON1Q9Y6Q2 735 aa11.16□□□□□ -0.62
CAPN3-202ENST00000337571 ATXN2Q99700 1313 aaKnown RBP11.15□□□□□ -0.62
CAPN3-202ENST00000337571 IGHV1OR15-9A0A0B4J2B8 117 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 WASH3PC4AMC7 463 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 PENKP01210 267 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-202ENST00000337571 SYPP08247 313 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 SERPINF2P08697 491 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 ACADMP11310 421 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 RDXP35241 583 aaKnown RBP11.15□□□□□ -0.62
CAPN3-202ENST00000337571 MFAP3P55082 362 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 PDE4CQ08493 712 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 ZNF252P-AS1Q0IIN9 211 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 CCDC40Q4G0X9 1142 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 WDR45BQ5MNZ6 344 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 FYB2Q5VWT5 728 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 ANKS1BQ7Z6G8 1248 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 CPXM2Q8N436 756 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 TRIML1Q8N9V2 468 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 UBA3Q8TBC4 463 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 GOLGA1Q92805 767 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 DHTKD1Q96HY7 919 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-202ENST00000337571 MRGPRX1Q96LB2 322 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 SLC2A11Q9BYW1 496 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 ULBP1Q9BZM6 244 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 CIPCQ9C0C6 399 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 ABCC13Q9NSE7 274 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 ELOVL2Q9NXB9 296 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 FBXO10Q9UK96 956 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 HCN2Q9UL51 889 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 PLA2G4CQ9UP65 541 aa11.15□□□□□ -0.62
CAPN3-202ENST00000337571 HBS1LQ9Y450 684 aaKnown RBP11.15□□□□□ -0.62
CAPN3-202ENST00000337571 TNRC6BQ9UPQ9 1833 aaKnown RBP11.14□□□□□ -0.63
CAPN3-202ENST00000337571 GIPC1O14908 333 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 NUDT7P0C024 238 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 SETSIPP0DME0 302 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 LCP1P13796 627 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 OXTRP30559 389 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 ZNF445P59923 1031 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 ADIGQ0VDE8 80 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 FOXC1Q12948 553 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms