RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 CC2D1AQ6P1N0 951 aaPredicted RBP14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 SCYL2Q6P3W7 929 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 SND1Q7KZF4 910 aaKnown RBP eCLIP14.27□□□□□ -0.123e-24■□□□□ 9.3
TUBA1B-202ENST00000336023 FAM131BQ86XD5 332 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 ARID3BQ8IVW6 561 aaPredicted RBP14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 ZSCAN18Q8TBC5 510 aaPredicted RBP14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 RNF34Q969K3 372 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 SLC39A13Q96H72 371 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 ZFRQ96KR1 1074 aaKnown RBP14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 MYADMQ96S97 322 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 NCAPGQ9BPX3 1015 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 SMG9Q9H0W8 520 aaKnown RBP14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 CDH7Q9ULB5 785 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 ARHGAP26Q9UNA1 814 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 TLR6Q9Y2C9 796 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 SPOPO43791 374 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 KIF5CO60282 957 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 CCR1P32246 355 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 PCK1P35558 622 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 SSR1P43307 286 aaKnown RBP14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 KCNQ1P51787 676 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 ZXDBP98169 803 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 LEXMQ3ZCV2 418 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 SLFN11Q7Z7L1 901 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 ZSCAN30Q86W11 494 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 SYCE1Q8N0S2 351 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 TRIM58Q8NG06 486 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 USP13Q92995 863 aaPredicted RBP14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 ALS2CR12Q96Q35 445 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 WDCPQ9H6R7 721 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 TDP1Q9NUW8 608 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 TMEM51Q9NW97 253 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 PCSK1NQ9UHG2 260 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 CCL26Q9Y258 94 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 C2orf16Q68DN1 1984 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 PRAMEF12O95522 483 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 IGLV3-27P01718 113 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 IRF1P10914 325 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 TCF4P15884 667 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 WEE1P30291 646 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 RING1Q06587 406 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 PPP2R5DQ14738 602 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 FAM78AQ5JUQ0 283 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 TTC16Q8NEE8 873 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 SMARCD2Q92925 531 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 FCRL2Q96LA5 508 aaPredicted RBP14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 ASB16Q96NS5 453 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 USP18Q9UMW8 372 aa14.26□□□□□ -0.13
TUBA1B-202ENST00000336023 LEFTY2O00292 366 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 PRPSAP2O60256 369 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 STC2O76061 302 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 FTCDO95954 541 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 SLC2A3P11169 496 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 IL1R2P27930 398 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 TAS2R40P59535 323 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 ZNF569Q5MCW4 686 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 BRMS1LQ5PSV4 323 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 NUGGCQ68CJ6 796 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 OTOP3Q7RTS5 596 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 PEX26Q7Z412 305 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 UNC45BQ8IWX7 931 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 ADAMTS19Q8TE59 1207 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 SH3RF2Q8TEC5 729 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 WBP2Q969T9 261 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 PLD4Q96BZ4 506 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 PEBP4Q96S96 227 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 TKTL2Q9H0I9 626 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 PRDM6Q9NQX0 595 aa14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 ZFP37Q9Y6Q3 630 aaPredicted RBP14.25□□□□□ -0.13
TUBA1B-202ENST00000336023 ANAPC1Q9H1A4 1944 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 KCNU1A8MYU2 1149 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 MOCS2O96007 188 aaPredicted RBP14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 APOEP02649 317 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 LAMP2P13473 410 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 TNNT1P13805 278 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 ADRA1BP35368 520 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 HARS2P49590 506 aaKnown RBP14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 SLC25A11Q02978 314 aaKnown RBP14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 TFF2Q03403 129 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 HADHQ16836 314 aaKnown RBP14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 TXNRD3NBQ6F5E7 133 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 NT5DC3Q86UY8 548 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 DDX42Q86XP3 938 aaKnown RBP eCLIP14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 CCDC185Q8N715 623 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 ZWILCHQ9H900 591 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 ANLNQ9NQW6 1124 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 ARHGEF38Q9NXL2 777 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 CFAP97Q9P2B7 532 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 AMFRQ9UKV5 643 aa14.24□□□□□ -0.13
TUBA1B-202ENST00000336023 I6L893 689 aaPredicted RBP14.23□□□□□ -0.13
TUBA1B-202ENST00000336023 KLKB1P03952 638 aa14.23□□□□□ -0.13
TUBA1B-202ENST00000336023 SP100P23497 879 aaPredicted RBP14.23□□□□□ -0.13
TUBA1B-202ENST00000336023 CORO1AP31146 461 aaKnown RBP14.23□□□□□ -0.13
TUBA1B-202ENST00000336023 VIPR2P41587 438 aa14.23□□□□□ -0.13
TUBA1B-202ENST00000336023 GNG11P61952 73 aa14.23□□□□□ -0.13
TUBA1B-202ENST00000336023 SMAD2Q15796 467 aaKnown RBP14.23□□□□□ -0.13
TUBA1B-202ENST00000336023 ARL13BQ3SXY8 428 aa14.23□□□□□ -0.13
TUBA1B-202ENST00000336023 BOLA3Q53S33 107 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms