RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 DEUP1Q05D60 604 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 RING1Q06587 406 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 NME3Q13232 169 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 PIGHQ14442 188 aaPredicted RBP18.21■□□□□ 0.51
CHGA-202ENST00000334654 MESDQ14696 234 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 ACAP1Q15027 740 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 PUS10Q3MIT2 529 aaKnown RBP18.21■□□□□ 0.51
CHGA-202ENST00000334654 OTOP3Q7RTS5 596 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 ST13P5Q8NFI4 369 aaPredicted RBP18.21■□□□□ 0.51
CHGA-202ENST00000334654 NACA2Q9H009 215 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 FAM204AQ9H8W3 233 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 LZTFL1Q9NQ48 299 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 MYO10Q9HD67 2058 aa18.21■□□□□ 0.51
CHGA-202ENST00000334654 SYNJ2BP-COX16A0A087WUM0 186 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 MACROD2A1Z1Q3 448 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 C2CD4DB7Z1M9 353 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 LEFTY2O00292 366 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 KRT86O43790 486 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 LRCH4O75427 683 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 MOCS3O95396 460 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 F9P00740 461 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 HMBSP08397 361 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 TCF4P15884 667 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 SP100P23497 879 aaPredicted RBP18.2■□□□□ 0.5
CHGA-202ENST00000334654 GBP1P32455 592 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 RDXP35241 583 aaKnown RBP18.2■□□□□ 0.5
CHGA-202ENST00000334654 TBX4P57082 545 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 USP4Q13107 963 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 ZNF77Q15935 545 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 ZC3H12AQ5D1E8 599 aaKnown RBP18.2■□□□□ 0.5
CHGA-202ENST00000334654 TANGO2Q6ICL3 276 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 CYP4V2Q6ZWL3 525 aaPredicted RBP18.2■□□□□ 0.5
CHGA-202ENST00000334654 CCAR2Q8N163 923 aaKnown RBP18.2■□□□□ 0.5
CHGA-202ENST00000334654 RNF10Q8N5U6 811 aaKnown RBP18.2■□□□□ 0.5
CHGA-202ENST00000334654 LRRC57Q8N9N7 239 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 KIAA1524Q8TCG1 905 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 SH3RF2Q8TEC5 729 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 TSGA10Q9BZW7 698 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 GOLPH3Q9H4A6 298 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 KCND1Q9NSA2 647 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 TRMT1Q9NXH9 659 aaKnown RBP18.2■□□□□ 0.5
CHGA-202ENST00000334654 COX16Q9P0S2 106 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 THEGQ9P2T0 379 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 GUCA1BQ9UMX6 200 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 KIF26AQ9ULI4 1882 aaPredicted RBP18.2■□□□□ 0.5
CHGA-202ENST00000334654 KCNU1A8MYU2 1149 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 PARM1Q6UWI2 310 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 Q6ZNB5 142 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 FGF14Q92915 247 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 PLD4Q96BZ4 506 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 PLA2G2FQ9BZM2 168 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 TMPRSS4Q9NRS4 437 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 ARHGEF38Q9NXL2 777 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 CAPN6Q9Y6Q1 641 aa18.2■□□□□ 0.5
CHGA-202ENST00000334654 GRID2IPA4D2P6 1211 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 ANHXE9PGG2 379 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 ZSCAN12O43309 604 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 IRF1P10914 325 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 MIPP30301 263 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 MAN1A1P33908 653 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 PCK1P35558 622 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 KPNA1P52294 538 aaPredicted RBP18.19■□□□□ 0.5
CHGA-202ENST00000334654 PPP2R5DQ14738 602 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 CC2D1AQ6P1N0 951 aaPredicted RBP18.19■□□□□ 0.5
CHGA-202ENST00000334654 HTR3DQ70Z44 454 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 SLFN11Q7Z7L1 901 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 FAM131BQ86XD5 332 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 CELF5Q8N6W0 485 aaKnown RBP18.19■□□□□ 0.5
CHGA-202ENST00000334654 CALR3Q96L12 384 aaKnown RBP18.19■□□□□ 0.5
CHGA-202ENST00000334654 PEBP4Q96S96 227 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 RPP25Q9BUL9 199 aaKnown RBP18.19■□□□□ 0.5
CHGA-202ENST00000334654 IRX2Q9BZI1 471 aaPredicted RBP18.19■□□□□ 0.5
CHGA-202ENST00000334654 KIF9Q9HAQ2 790 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.19■□□□□ 0.5
CHGA-202ENST00000334654 OBP2AQ9NY56 170 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 CFAP97Q9P2B7 532 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 XPO7Q9UIA9 1087 aaKnown RBP18.19■□□□□ 0.5
CHGA-202ENST00000334654 LCMT1Q9UIC8 334 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 ALG6Q9Y672 507 aa18.19■□□□□ 0.5
CHGA-202ENST00000334654 TMEM110-MUSTN1A8MSY1 372 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 RNF8O76064 485 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 IL1R2P27930 398 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 CCR1P32246 355 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 ARHGAP29Q52LW3 1261 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 BRMS1LQ5PSV4 323 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 ARTNQ5T4W7 220 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 TXNRD3NBQ6F5E7 133 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 C11orf63Q6NUN7 778 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 C17orf53Q8N3J3 647 aaPredicted RBP18.18■□□□□ 0.5
CHGA-202ENST00000334654 CCDC185Q8N715 623 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 ACSF2Q96CM8 615 aaPredicted RBP18.18■□□□□ 0.5
CHGA-202ENST00000334654 RPGRIP1Q96KN7 1286 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 MAGEB5Q9BZ81 275 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 WDCPQ9H6R7 721 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 ZFP14Q9HCL3 533 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 HYOU1Q9Y4L1 999 aa18.18■□□□□ 0.5
CHGA-202ENST00000334654 MYOFQ9NZM1 2061 aa18.17■□□□□ 0.5
CHGA-202ENST00000334654 E2F8A0AVK6 867 aa18.17■□□□□ 0.5
CHGA-202ENST00000334654 HEPACAM2A8MVW5 462 aa18.17■□□□□ 0.5
CHGA-202ENST00000334654 LOC730098B7Z3J9 87 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms