RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 SNNO75324 88 aaPredicted RBP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 ZBED1O96006 694 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 ICAM1P05362 532 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 SRGAP2CP0DJJ0 459 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 SRGAP2BP0DMP2 458 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 PTPN20Q4JDL3 420 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 PDPK2PQ6A1A2 396 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 DENND1BQ6P3S1 775 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 KLC3Q6P597 504 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 MAP7D3Q8IWC1 876 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 AGR3Q8TD06 166 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 C17orf50Q8WW18 174 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 UPF1Q92900 1129 aaKnown RBP eCLIP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 DCUN1D1Q96GG9 259 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 RPAP3Q9H6T3 665 aaPredicted RBP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 SPATA7Q9P0W8 599 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 MYOCOSA0A1B0GUC4 107 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 TFAP2AP05549 437 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ATP5BP06576 529 aaKnown RBP14.16□□□□□ -0.14
SYNE3-201ENST00000334258 CRHR1P34998 444 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ORC1Q13415 861 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 KCNJ11Q14654 390 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 CDO1Q16878 200 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 N4BP2L1Q5TBK1 243 aaPredicted RBP14.16□□□□□ -0.14
SYNE3-201ENST00000334258 SCYL2Q6P3W7 929 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ZBTB33Q86T24 672 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 NIPA2Q8N8Q9 360 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ATP2A3Q93084 1043 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 CLMNQ96JQ2 1002 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 CGRRF1Q99675 332 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 MRPL1Q9BYD6 325 aaKnown RBP14.16□□□□□ -0.14
SYNE3-201ENST00000334258 RSAD1Q9HA92 442 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 XPNPEP1Q9NQW7 623 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 PAK5Q9P286 719 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ZNF180Q9UJW8 692 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 USP18Q9UMW8 372 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 TCRBV5S1A1TA0A578 114 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ADM5C9JUS6 153 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 F5H423 210 aaPredicted RBP14.16□□□□□ -0.14
SYNE3-201ENST00000334258 H0YCG3 227 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 AIM2O14862 343 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 VILLO15195 856 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 CHADO15335 359 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ATP9BO43861 1147 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 MCCD1P59942 119 aaPredicted RBP14.16□□□□□ -0.14
SYNE3-201ENST00000334258 KRT81Q14533 505 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ARCQ7LC44 396 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ACTRT2Q8TDY3 377 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 PRICKLE1Q96MT3 831 aaPredicted RBP14.16□□□□□ -0.14
SYNE3-201ENST00000334258 CATSPER2Q96P56 530 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 BTBD9Q96Q07 612 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 MTMR12Q9C0I1 747 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 POPDC2Q9HBU9 364 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 MAN1C1Q9NR34 630 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 RNF181Q9P0P0 153 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ARHGAP28Q9P2N2 729 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 BIRC5O15392 142 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 STRNO43815 780 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 MSX2P35548 267 aaPredicted RBP14.16□□□□□ -0.14
SYNE3-201ENST00000334258 GALK1P51570 392 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ADARP55265 1226 aaKnown RBP14.16□□□□□ -0.14
SYNE3-201ENST00000334258 CLDN10P78369 228 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 HPCAP84074 193 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 TFAMQ00059 246 aaKnown RBP14.16□□□□□ -0.14
SYNE3-201ENST00000334258 PGM5Q15124 567 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 SLFN12LQ6IEE8 588 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 UNC5AQ6ZN44 842 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 FRMD7Q6ZUT3 714 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 SAPCD2Q86UD0 394 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 FBXW8Q8N3Y1 598 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 KCNK16Q96T55 309 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ZNF518BQ9C0D4 1074 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 NRDE2Q9H7Z3 1164 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 SUN2Q9UH99 717 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ITGA11Q9UKX5 1188 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 ARHGAP26Q9UNA1 814 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 TELO2Q9Y4R8 837 aa14.16□□□□□ -0.14
SYNE3-201ENST00000334258 QSER1Q2KHR3 1735 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 ARHGAP10A1A4S6 786 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 E9PBE3 544 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 TRDMT1O14717 391 aaKnown RBP14.15□□□□□ -0.14
SYNE3-201ENST00000334258 CFLARO15519 480 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 KLHL41O60662 606 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 ITGAXP20702 1163 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 RARS2Q5T160 578 aaKnown RBP14.15□□□□□ -0.14
SYNE3-201ENST00000334258 ADGRF2Q8IZF7 708 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 PQLC1Q8N2U9 271 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 PHTF2Q8N3S3 785 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 USP29Q9HBJ7 922 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 HSFX1Q9UBD0 423 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 FOCADQ5VW36 1801 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 LAMA2P24043 3122 aaKnown RBP14.15□□□□□ -0.14
SYNE3-201ENST00000334258 PIK3R2O00459 728 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 RBL1P28749 1068 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 HDAC4P56524 1084 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 TFDP2Q14188 446 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 TEDDM1Q5T9Z0 273 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 BSPRYQ5W0U4 402 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms