RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 RTP4Q96DX8 246 aa19.58■□□□□ 0.72
RFTN1-201ENST00000334133 LBHD1Q9BQE6 289 aaPredicted RBP19.58■□□□□ 0.72
RFTN1-201ENST00000334133 MED10Q9BTT4 135 aa19.58■□□□□ 0.72
RFTN1-201ENST00000334133 SMIM35A0A1B0GVV1 85 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 E2F8A0AVK6 867 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 WDR27A2RRH5 827 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 SMAPO00193 183 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 TM9SF1O15321 606 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 GMPRP36959 345 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 SWT1Q5T5J6 900 aaKnown RBP19.57■□□□□ 0.72
RFTN1-201ENST00000334133 CRYBG2Q8N1P7 616 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 SIGLEC10Q96LC7 697 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 CYLDQ9NQC7 956 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 ZFP69BQ9UJL9 534 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 GNEQ9Y223 722 aaKnown RBP19.57■□□□□ 0.72
RFTN1-201ENST00000334133 M0QYT0 321 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 CCNB1P14635 433 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 ETV4P43268 484 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 NEK3P51956 506 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 MDH1BQ5I0G3 518 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 TTC39BQ5VTQ0 682 aaPredicted RBP19.57■□□□□ 0.72
RFTN1-201ENST00000334133 KIAA0319Q5VV43 1072 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 APBB1IPQ7Z5R6 666 aaPredicted RBP19.57■□□□□ 0.72
RFTN1-201ENST00000334133 ANKRD23Q86SG2 305 aa19.57■□□□□ 0.72
RFTN1-201ENST00000334133 SMG8Q8ND04 991 aaKnown RBP19.57■□□□□ 0.72
RFTN1-201ENST00000334133 TACO1Q9BSH4 297 aaKnown RBP19.57■□□□□ 0.72
RFTN1-201ENST00000334133 MARCOQ9UEW3 520 aaPredicted RBP19.57■□□□□ 0.72
RFTN1-201ENST00000334133 CFAP69A5D8W1 941 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 APOEP02649 317 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 AMHP03971 560 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 KITP10721 976 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 PSEN2P49810 448 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 RNF169Q8NCN4 708 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 STK32AQ8WU08 396 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 CENPIQ92674 756 aaPredicted RBP19.56■□□□□ 0.72
RFTN1-201ENST00000334133 LPPQ93052 612 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 PARK7Q99497 189 aaKnown RBP19.56■□□□□ 0.72
RFTN1-201ENST00000334133 SSU72Q9NP77 194 aaKnown RBP19.56■□□□□ 0.72
RFTN1-201ENST00000334133 HEY2Q9UBP5 337 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 KCNK1O00180 336 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 CELF2O95319 508 aaKnown RBP19.56■□□□□ 0.72
RFTN1-201ENST00000334133 CD4P01730 458 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 CTSHP09668 335 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 TROVE2P10155 538 aaKnown RBP eCLIP19.56■□□□□ 0.72
RFTN1-201ENST00000334133 EPHB2P29323 1055 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 ARL4AP40617 200 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 SERPINB4P48594 390 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 FAM110CQ1W6H9 321 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 HTR3CQ8WXA8 447 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 KCNK16Q96T55 309 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 VPS11Q9H270 941 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 ARHGEF4Q9NR80 690 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 MBLAC1A4D2B0 266 aaPredicted RBP19.56■□□□□ 0.72
RFTN1-201ENST00000334133 DCTN3O75935 186 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 ANKRD20A2Q5SQ80 823 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 ANKRD20A1Q5TYW2 823 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 ANKRD20A3Q5VUR7 823 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 ZDHHC17Q8IUH5 632 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 ALKBH8Q96BT7 664 aaKnown RBP19.56■□□□□ 0.72
RFTN1-201ENST00000334133 RHOBTB2Q9BYZ6 727 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 TXLNGQ9NUQ3 528 aa19.56■□□□□ 0.72
RFTN1-201ENST00000334133 FAM237BA0A1B0GVD1 139 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 FAM72CH0Y354 149 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 USP12O75317 370 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 KRT37O76014 449 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 MYCNP04198 464 aaPredicted RBP19.55■□□□□ 0.72
RFTN1-201ENST00000334133 SNRPAP09012 282 aaKnown RBP19.55■□□□□ 0.72
RFTN1-201ENST00000334133 MATKP42679 507 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 SNX16P57768 344 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 MRPS5P82675 430 aaKnown RBP19.55■□□□□ 0.72
RFTN1-201ENST00000334133 PAN2Q504Q3 1202 aaKnown RBP19.55■□□□□ 0.72
RFTN1-201ENST00000334133 FAM72AQ5TYM5 149 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 OTUD1Q5VV17 481 aaPredicted RBP19.55■□□□□ 0.72
RFTN1-201ENST00000334133 SPRYD7Q5W111 196 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 CES4AQ5XG92 561 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 FAM72DQ6L9T8 149 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 ZCCHC23Q6ZST2 131 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 PAQR9Q6ZVX9 377 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 TTC7BQ86TV6 843 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 FAM72BQ86X60 149 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 DEPDC1BQ8WUY9 529 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 TFB1MQ8WVM0 346 aaKnown RBP19.55■□□□□ 0.72
RFTN1-201ENST00000334133 ZNF560Q96MR9 790 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 AGAP3Q96P47 875 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 HMX2A2RU54 273 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 I3L4J1 428 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 PTGESO14684 152 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 NRP1O14786 923 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 RFPL1O75677 317 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 SERPINB3P29508 390 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 SLC18A2Q05940 514 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 COLGALT1Q8NBJ5 622 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 QKIQ96PU8 341 aaKnown RBP eCLIP19.55■□□□□ 0.72
RFTN1-201ENST00000334133 EBNA1BP2Q99848 306 aaKnown RBP19.55■□□□□ 0.72
RFTN1-201ENST00000334133 LRRC4Q9HBW1 653 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 PIGVQ9NUD9 493 aa19.55■□□□□ 0.72
RFTN1-201ENST00000334133 GCATO75600 419 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 ALADP13716 330 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 CCDC15Q0P6D6 951 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 NDUFAF2Q8N183 169 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms