RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 MYBPC1Q00872 1141 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 PPIL2Q13356 520 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 MTMR1Q13613 665 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 KRT81Q14533 505 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 PSMD6Q15008 389 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 KCNT1Q5JUK3 1230 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 LBX2Q6XYB7 198 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 NDUFAF2Q8N183 169 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 PQLC1Q8N2U9 271 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 PIWIL2Q8TC59 973 aaKnown RBP18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 C6orf203Q9P0P8 240 aaPredicted RBP18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 KCNH4Q9UQ05 1017 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 UGT1A9O60656 530 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 IL1R2P27930 398 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 CRHR1P34998 444 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 CLCN2P51788 898 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 TAP1Q03518 808 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 APOFQ13790 326 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 CNGA3Q16281 694 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 TAZQ16635 292 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 XRRA1Q6P2D8 792 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 PPP1R14CQ8TAE6 165 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 MMP19Q99542 508 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 NRDE2Q9H7Z3 1164 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 UGT1A7Q9HAW7 530 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 UGT1A10Q9HAW8 530 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 UGT1A8Q9HAW9 530 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 TMEM165Q9HC07 324 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 AGO4Q9HCK5 861 aaKnown RBP18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 SMYD2Q9NRG4 433 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 BTBD7Q9P203 1132 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 APPL1Q9UKG1 709 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 RAB26Q9ULW5 256 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 ITM2AO43736 263 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 KDELR1P24390 212 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 PRKCHP24723 683 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 SOX10P56693 466 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 NUP93Q8N1F7 819 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 LRRC43Q8N309 656 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 MRPL1Q9BYD6 325 aaKnown RBP18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 POPDC2Q9HBU9 364 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 PSMD13Q9UNM6 376 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 MCF2LO15068 1137 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 ADCY3O60266 1144 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 SRGAP2CP0DJJ0 459 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 SRGAP2BP0DMP2 458 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 RBP3P10745 1247 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 PEX6Q13608 980 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 BORAQ6PGQ7 559 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 MAVSQ7Z434 540 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 RFX6Q8HWS3 928 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 THNSL1Q8IYQ7 743 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 CHST13Q8NET6 341 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 NSUN6Q8TEA1 469 aaKnown RBP18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 SNRNP27Q8WVK2 155 aaKnown RBP18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 TFB1MQ8WVM0 346 aaKnown RBP18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 CMTM5Q96DZ9 223 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 CNBD2Q96M20 576 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 PLAC1Q9HBJ0 212 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 SLC9A2Q9UBY0 812 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 ZC3H7BQ9UGR2 993 aaKnown RBP18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 AP4B1Q9Y6B7 739 aa18.69■□□□□ 0.58
CLSTN3-202ENST00000331148 LOC285556D6RIA3 1793 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 MYOCOSA0A1B0GUC4 107 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 APOC4-APOC2K7ER74 178 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 MAGEB3O15480 346 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 EXTL3O43909 919 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 TRMUO75648 421 aaKnown RBP18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 KRT38O76015 456 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 TOP3BO95985 862 aaKnown RBP18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 APOC2P02655 101 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 NR3C2P08235 984 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 KRT7P08729 469 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 CSH1P0DML2 217 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 CSH2P0DML3 217 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 TBXAS1P24557 533 aaPredicted RBP18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 YY1P25490 414 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 PSMA2P25787 234 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 MTTPP55157 894 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 GK3PQ14409 553 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 FASTKD1Q53R41 847 aaKnown RBP18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 LDLRAD1Q5T700 205 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 TEDDM1Q5T9Z0 273 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 CYP4A22Q5TCH4 519 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 MBLAC2Q68D91 279 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 TSHZ1Q6ZSZ6 1077 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 ARFGAP1Q8N6T3 406 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 NUB1Q9Y5A7 615 aa18.68■□□□□ 0.58
CLSTN3-202ENST00000331148 CHADO15335 359 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 LSM8O95777 96 aaKnown RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 CCND2P30279 289 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 MAGEA10P43363 369 aaPredicted RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 ZNF132P52740 706 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 USP41Q3LFD5 358 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 FRMD7Q6ZUT3 714 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 RSPH3Q86UC2 560 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 ZNF410Q86VK4 478 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms