RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MAP7D1Q3KQU3 841 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 POLNQ7Z5Q5 900 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 DDHD1Q8NEL9 900 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 MMP19Q99542 508 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 GCOM2Q9BZD3 368 aaPredicted RBP25.07■■□□□ 1.6
SOX1-201ENST00000330949 TUBA8Q9NY65 449 aaPredicted RBP25.07■■□□□ 1.6
SOX1-201ENST00000330949 ZNF701M0R085 212 aaPredicted RBP25.07■■□□□ 1.6
SOX1-201ENST00000330949 ZMPSTE24O75844 475 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 TMED10P49755 219 aaKnown RBP25.07■■□□□ 1.6
SOX1-201ENST00000330949 ANKDD1AQ495B1 522 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 ITPRIPL1Q6GPH6 555 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 MAVSQ7Z434 540 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 LILRA2Q8N149 483 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 XPNPEP1Q9NQW7 623 aa25.07■■□□□ 1.6
SOX1-201ENST00000330949 FAM32AQ9Y421 112 aaKnown RBP25.07■■□□□ 1.6
SOX1-201ENST00000330949 A0A1B0GTW7 788 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 C3orf70A6NLC5 250 aaPredicted RBP25.06■■□□□ 1.6
SOX1-201ENST00000330949 H0YJX3 145 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 DCXO43602 365 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 ARP10275 920 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 MMP8P22894 467 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 GABRB2P47870 512 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 PEX3P56589 373 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 STXBP5Q5T5C0 1151 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 DNAJC24Q6P3W2 148 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 C16orf89Q6UX73 402 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 DCDC5Q6ZRR9 648 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 PHTF2Q8N3S3 785 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 SGF29Q96ES7 293 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 ZC3H7BQ9UGR2 993 aaKnown RBP25.06■■□□□ 1.6
SOX1-201ENST00000330949 HEY1Q9Y5J3 304 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 MMP10P09238 476 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 KCTD21Q4G0X4 260 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 CEP55Q53EZ4 464 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 GSDMBQ8TAX9 411 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 HSPH1Q92598 858 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 FBXL18Q96ME1 805 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 TCHPQ9BT92 498 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 FRMD8Q9BZ67 464 aaPredicted RBP25.06■■□□□ 1.6
SOX1-201ENST00000330949 FBXO28Q9NVF7 368 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 EPS15L1Q9UBC2 864 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 TMEM98Q9Y2Y6 226 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 LTBP1Q14766 1721 aa25.06■■□□□ 1.6
SOX1-201ENST00000330949 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.05■■□□□ 1.6
SOX1-201ENST00000330949 TMEM150BA6NC51 233 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 CALB1P05937 261 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 TFPTP0C1Z6 253 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 SSTR3P32745 418 aaPredicted RBP25.05■■□□□ 1.6
SOX1-201ENST00000330949 OLFML1Q6UWY5 402 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 TMEM110Q86TL2 294 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 PRMT6Q96LA8 375 aaPredicted RBP25.05■■□□□ 1.6
SOX1-201ENST00000330949 PAIP1Q9H074 479 aaKnown RBP25.05■■□□□ 1.6
SOX1-201ENST00000330949 FGF3P11487 239 aaPredicted RBP25.05■■□□□ 1.6
SOX1-201ENST00000330949 SLC5A3P53794 718 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 ESRRGP62508 458 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 CBLBQ13191 982 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 KCNJ11Q14654 390 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 BCL2A1Q16548 175 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 B3GNT9Q6UX72 402 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 ADGRF2Q8IZF7 708 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 PKP2Q99959 881 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 EIF2AQ9BY44 585 aaKnown RBP25.05■■□□□ 1.6
SOX1-201ENST00000330949 SLC38A7Q9NVC3 462 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 RNF11Q9Y3C5 154 aa25.05■■□□□ 1.6
SOX1-201ENST00000330949 ARHGEF37A1IGU5 675 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 H3BNH8 94 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 CHADO15335 359 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 ADAM23O75077 832 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 SERPINE1P05121 402 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 EIF3EP60228 445 aaKnown RBP25.04■■□□□ 1.6
SOX1-201ENST00000330949 PPP1R10Q96QC0 940 aaKnown RBP25.04■■□□□ 1.6
SOX1-201ENST00000330949 CAAP1Q9H8G2 361 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 TBX20Q9UMR3 447 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 TRIM17Q9Y577 477 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 PCDHB4Q9Y5E5 795 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 PRSS51A0A1B0GVH4 220 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 MCF2LO15068 1137 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 AVILO75366 819 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 NPR1P16066 1061 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 GRK2P25098 689 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 TAP1Q03518 808 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 ENPEPQ07075 957 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 TMEM270Q6UE05 265 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 GPR141Q7Z602 305 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 UBR7Q8N806 425 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 NIPA2Q8N8Q9 360 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 SCAIQ8N9R8 606 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 HM13Q8TCT9 377 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 RMND5BQ96G75 393 aaPredicted RBP25.04■■□□□ 1.6
SOX1-201ENST00000330949 PNPLA3Q9NST1 481 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 BAIAP3O94812 1187 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 RARRES1P49788 294 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 SERPINB9P50453 376 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 OGDHQ02218 1023 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 KLF10Q13118 480 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 MROH9Q5TGP6 573 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 GPR180Q86V85 440 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 CDAN1Q8IWY9 1227 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 ISOC1Q96CN7 298 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 OSBPL11Q9BXB4 747 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms