RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 ACADMP11310 421 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 SLC16A1P53985 500 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 ALDH6A1Q02252 535 aaKnown RBP10.46□□□□□ -0.74
CHD3-201ENST00000330494 FAM153CQ494X1 144 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 SLC44A4Q53GD3 710 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 C4orf22Q6V702 233 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 ACTRT1Q8TDG2 376 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 CNDP1Q96KN2 507 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 ZNF518BQ9C0D4 1074 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 BATF3Q9NR55 127 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 PSD3Q9NYI0 1048 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 FAM153AQ9UHL3 310 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 CDV3Q9UKY7 258 aaKnown RBP10.46□□□□□ -0.74
CHD3-201ENST00000330494 PLA2G4CQ9UP65 541 aa10.46□□□□□ -0.74
CHD3-201ENST00000330494 MOXD2PA6NHM9 499 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 F8VP50 259 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 ACKR2O00590 384 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 ATP9AO75110 1047 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 F9P00740 461 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 HMGCRP04035 888 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 RPL21P46778 160 aaKnown RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 DNAL1Q4LDG9 190 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 MFSD7Q6UXD7 560 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 MTFMTQ96DP5 389 aaKnown RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 MTMR9Q96QG7 549 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 DCDC2Q9UHG0 476 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 ADGRB2O60241 1585 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 KPNA6O60684 536 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 LSM8O95777 96 aaKnown RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 ADRB2P07550 413 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 SMIM10L2AP0DMW4 78 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 SMIM10L2BP0DMW5 78 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 ECM1Q16610 540 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 TJAP1Q5JTD0 557 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 ERAP2Q6P179 960 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 RBM43Q6ZSC3 357 aaKnown RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 GPAMQ9HCL2 828 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 RICTORQ6R327 1708 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 MROH7Q68CQ1 1323 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 TBC1D4O60343 1298 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 FBXO21O94952 628 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 GLRA2P23416 452 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 CHI3L1P36222 383 aaPredicted RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 TTLL9Q3SXZ7 439 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 DOK6Q6PKX4 331 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 APBA2Q99767 749 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 UBXN6Q9BZV1 441 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 DCLK3Q9C098 648 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 RIC8BQ9NVN3 520 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 GLRA3O75311 464 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 SERPINB3P29508 390 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 WASHC5Q12768 1159 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 SOCS4Q8WXH5 440 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 THAP11Q96EK4 314 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 ZNF333Q96JL9 665 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 SENP8Q96LD8 212 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 ACOX2Q99424 681 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 SLC27A5Q9Y2P5 690 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 XPO1O14980 1071 aaKnown RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 PARNO95453 639 aaKnown RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 RARAP10276 462 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 YWHAQP27348 245 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 MIPP30301 263 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 HIST2H2ACQ16777 129 aaPredicted RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 ZNF284Q2VY69 593 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 PAPD7Q5XG87 772 aaKnown RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 HIST2H2AA3Q6FI13 130 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 BTNL9Q6UXG8 535 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 C1orf186Q6ZWK4 172 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 B3GALNT2Q8NCR0 500 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 TINF2Q9BSI4 451 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 ADGRE3Q9BY15 652 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 FOXP3Q9BZS1 431 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 RERGLQ9H628 205 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 TMBIM4Q9HC24 238 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 GID8Q9NWU2 228 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 ELK3P41970 407 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 KPNA1P52294 538 aaPredicted RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 MMRN1Q13201 1228 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 CAMK2GQ13555 558 aaPredicted RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 MARC1Q5VT66 337 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.45□□□□□ -0.742e-6■■■■■ 29
CHD3-201ENST00000330494 ULBP1Q9BZM6 244 aa10.45□□□□□ -0.74
CHD3-201ENST00000330494 GEMIN8Q9NWZ8 242 aaKnown RBP10.45□□□□□ -0.74
CHD3-201ENST00000330494 KIF1AQ12756 1690 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 H2AFYO75367 372 aaKnown RBP10.44□□□□□ -0.74
CHD3-201ENST00000330494 PLK1P53350 603 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 MPP3Q13368 585 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 RIOX2Q8IUF8 465 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 MYO1HQ8N1T3 1032 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 SAMD3Q8N6K7 520 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 TDRD5Q8NAT2 981 aaKnown RBP10.44□□□□□ -0.74
CHD3-201ENST00000330494 PORCNQ9H237 461 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 SHOC2Q9UQ13 582 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 CRYL1Q9Y2S2 319 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 RAMP2O60895 175 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 ABCB1P08183 1280 aaPredicted RBP10.44□□□□□ -0.74
CHD3-201ENST00000330494 ALOX15P16050 662 aaPredicted RBP10.44□□□□□ -0.74
CHD3-201ENST00000330494 HALP42357 657 aa10.44□□□□□ -0.74
CHD3-201ENST00000330494 NCALDP61601 193 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms