RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 SPTLC1O15269 473 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 NOL3O60936 208 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 RFPL1O75677 317 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 SERPINE1P05121 402 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 P4HBP07237 508 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 IDH3AP50213 366 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 NDST2P52849 883 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 CNTN2Q02246 1040 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 TUBA3CQ13748 450 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 DGKDQ16760 1214 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 UBE2SQ16763 222 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 INSCQ1MX18 579 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 LSM12Q3MHD2 195 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 DCAF6Q58WW2 860 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 TCHHL1Q5QJ38 904 aaPredicted RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 C1orf220Q5T0J3 134 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 SLX4IPQ5VYV7 408 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 EGFLAMQ63HQ2 1017 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 BNC2Q6ZN30 1099 aaPredicted RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 PRR23CQ6ZRP0 262 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 DENND5BQ6ZUT9 1274 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 FASTKD5Q7L8L6 764 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 LYSMD3Q7Z3D4 306 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 ARL10Q8N8L6 244 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 GLIS1Q8NBF1 620 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 KYQ8NBH2 561 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 HSPH1Q92598 858 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 EBF4Q9BQW3 602 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 WDR83Q9BRX9 315 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 MAN1C1Q9NR34 630 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 PARVAQ9NVD7 372 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 CDK5RAP2Q96SN8 1893 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 IGKV6D-41A0A0C4DH26 115 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 GOLGA8QA0A0J9YX86 632 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 RGSL1A5PLK6 1076 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 GOLGA8OA6NCC3 632 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 GOLGA8NF8WBI6 632 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 CHADO15335 359 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 TRPA1O75762 1119 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 NTSR2O95665 410 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 C1QAP02745 245 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 ZSCAN5DPP0CG00 497 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 ME2P23368 584 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 SREBF1P36956 1147 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 HARS2P49590 506 aaKnown RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 TAS2R40P59535 323 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 IKBKEQ14164 716 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 TRIM16LQ309B1 348 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 MGAT5BQ3V5L5 792 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 ANKDD1AQ495B1 522 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 TTC23LQ6PF05 361 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 FRMD7Q6ZUT3 714 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 ADGRF4Q8IZF3 695 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 NIPA2Q8N8Q9 360 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 MFSD2AQ8NA29 543 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 TMIGD2Q96BF3 282 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 CCDC124Q96CT7 223 aaKnown RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 MRRFQ96E11 262 aaKnown RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 ACCSQ96QU6 501 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 NACC1Q96RE7 527 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 WRNIP1Q96S55 665 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 ZNF347Q96SE7 839 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 KLF6Q99612 283 aaPredicted RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 SH3GL1Q99961 368 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 CPVLQ9H3G5 476 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 C12orf65Q9H3J6 166 aaKnown RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 VRTNQ9H8Y1 702 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 IFT122Q9HBG6 1241 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 GINM1Q9NU53 330 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 MTMR4Q9NYA4 1195 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 CHORDC1Q9UHD1 332 aaPredicted RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 ZNRF3Q9ULT6 936 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 PCDHGB4Q9UN71 923 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 MINPP1Q9UNW1 487 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 PCDHGB5Q9Y5G0 923 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 H3BMQ9 156 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 TNFRSF10AO00220 468 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 TADA2AO75478 443 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 HMGB2P26583 209 aaKnown RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 STAT3P40763 770 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 SLC1A6P48664 564 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 BMXP51813 675 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 TRAP1Q12931 704 aaKnown RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 KLF10Q13118 480 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 MAMLD1Q13495 774 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 COG2Q14746 738 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 NR1D2Q14995 579 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 MSS51Q4VC12 460 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 MBLAC2Q68D91 279 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 PPP4R4Q6NUP7 873 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 CAPN12Q6ZSI9 719 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 CDHR3Q6ZTQ4 885 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 MMAAQ8IVH4 418 aaKnown RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 FIBCD1Q8N539 461 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 CPSF7Q8N684 471 aaKnown RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 FEZF2Q8TBJ5 459 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 LENG9Q96B70 501 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 COG8Q96MW5 612 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 WDR12Q9GZL7 423 aaKnown RBP8.63□□□□□ -1.03
SKA2-201ENST00000330137 GPN2Q9H9Y4 310 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms