RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ADGRD2Q7Z7M1 963 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 PASD1Q8IV76 773 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 DEFB106AQ8N104 65 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 RXFP2Q8WXD0 754 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 CPA5Q8WXQ8 436 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 RPGRIP1Q96KN7 1286 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 ZNF670Q9BS34 389 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 WDCPQ9H6R7 721 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 DDIT4Q9NX09 232 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 JRKLQ9Y4A0 524 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 DENND4AQ7Z401 1863 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 GOLGA6CA6NDK9 693 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 GOLGA6BA6NDN3 693 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 EPOPA6NHQ4 379 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 ANHXE9PGG2 379 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 HOXC11O43248 304 aaPredicted RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 GOLGA6DP0CG33 693 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 MAPK8P45983 427 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 NR2C2P49116 596 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 RWDD2BP57060 319 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 CCZ1BP86790 482 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 CCZ1P86791 482 aaPredicted RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 ILF2Q12905 390 aaKnown RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 KRT81Q14533 505 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 ANO4Q32M45 955 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 C5orf22Q49AR2 442 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 DCAF6Q58WW2 860 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 C6orf118Q5T5N4 469 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 TIGD7Q6NT04 549 aaPredicted RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 PEX26Q7Z412 305 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 GRASPQ7Z6J2 395 aaPredicted RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 SLFN11Q7Z7L1 901 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 SETD3Q86TU7 594 aaPredicted RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 KATNAL2Q8IYT4 538 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 EXD1Q8NHP7 514 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 OSCP1Q8WVF1 389 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 GUCD1Q96NT3 240 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 SRPK1Q96SB4 655 aaKnown RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 PCDHB18PQ96TA0 734 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 LPIN3Q9BQK8 851 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 TRMT61BQ9BVS5 477 aaKnown RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 MAK16Q9BXY0 300 aaKnown RBP5.37□□□□□ -1.55
LRIT3-201ENST00000327908 TRPC7Q9HCX4 862 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 GOLGA6AQ9NYA3 693 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 CACNG4Q9UBN1 327 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 PCDHGC5Q9Y5F6 944 aa5.37□□□□□ -1.55
LRIT3-201ENST00000327908 TCRBV5S1A1TA0A578 114 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 HACD1B0YJ81 288 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 M0QYT0 321 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 PSMD3O43242 534 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 ARHGEF15O94989 841 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 VNN2O95498 520 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 RHOQP17081 205 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 PSMC3P17980 439 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 TGM2P21980 687 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 CA4P22748 312 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 RENBPP51606 427 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 CDH4P55283 916 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 RFTN1Q14699 578 aaPredicted RBP5.36□□□□□ -1.55
LRIT3-201ENST00000327908 MTF1Q14872 753 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 RPS6KA1Q15418 735 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 ZNF77Q15935 545 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 ADGRF1Q5T601 910 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 ERMARDQ5T6L9 678 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 GET4Q7L5D6 327 aaPredicted RBP5.36□□□□□ -1.55
LRIT3-201ENST00000327908 RALGPS2Q86X27 583 aaPredicted RBP5.36□□□□□ -1.55
LRIT3-201ENST00000327908 NPAS3Q8IXF0 933 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 MNS1Q8NEH6 495 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 CCHCR1Q8TD31 782 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 USP13Q92995 863 aaPredicted RBP5.36□□□□□ -1.55
LRIT3-201ENST00000327908 SLC39A13Q96H72 371 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 ZNF599Q96NL3 588 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 ASB16Q96NS5 453 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 MCEEQ96PE7 176 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 IRF2BPLQ9H1B7 796 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 DNPEPQ9ULA0 475 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 A0A1B0GVM2 712 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 GRID2IPA4D2P6 1211 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 TCAF2A6NFQ2 919 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 ARHGAP42A6NI28 874 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 F8W810 466 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 AP3B1O00203 1094 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 ATG13O75143 517 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 GLP2RO95838 553 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 LAMP2P13473 410 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 RRM1P23921 792 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 CLCN6P51797 869 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 GFPT1Q06210 699 aaPredicted RBP5.36□□□□□ -1.55
LRIT3-201ENST00000327908 EFEMP1Q12805 493 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 TEAD2Q15562 447 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 SLC14A2Q15849 920 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 ITPRIPL2Q3MIP1 535 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 TJAP1Q5JTD0 557 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 EP400NLQ6ZTU2 488 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 BNIPLQ7Z465 357 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 RBM23Q86U06 439 aaKnown RBP5.36□□□□□ -1.55
LRIT3-201ENST00000327908 C11orf74Q86VG3 221 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 CHSY1Q86X52 802 aa5.36□□□□□ -1.55
LRIT3-201ENST00000327908 TMEM139Q8IV31 216 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms