RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ASB3Q9Y575 518 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 CAPN9O14815 690 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 KRT1P04264 644 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 ZDHHC11BP0C7U3 371 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 TCF4P15884 667 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 GBP1P32455 592 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 PCK1P35558 622 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 GJC1P36383 396 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 GRIN2CQ14957 1233 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 ZNF697Q5TEC3 545 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 DUPD1Q68J44 220 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 ARHGAP18Q8N392 663 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 MREGQ8N565 214 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 NSUN3Q9H649 340 aaKnown RBP19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 TLR8Q9NR97 1041 aaKnown RBP19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 ABCC13Q9NSE7 274 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 FEZ2Q9UHY8 353 aaPredicted RBP19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 HPCAL4Q9UM19 191 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 TMEM265A0A087WTH1 108 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 ECHS1P30084 290 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 SULT1E1P49888 294 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 HLTFQ14527 1009 aaKnown RBP eCLIP19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 TRADDQ15628 312 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 CCNG2Q16589 344 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 SLC25A52Q3SY17 297 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 ATP13A4Q4VNC1 1196 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 ODF2Q5BJF6 829 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 TCEAL5Q5H9L2 206 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 RTL10Q7L3V2 364 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 BEND5Q7L4P6 421 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 CCDC105Q8IYK2 499 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 HS6ST3Q8IZP7 471 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 ADAM32Q8TC27 787 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 FAM172AQ8WUF8 416 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 NT5C3BQ969T7 300 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 ZNF512Q96ME7 567 aaPredicted RBP19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 NPY6RQ99463 290 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 NCAPGQ9BPX3 1015 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 HERPUD2Q9BSE4 406 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 IGFLR1Q9H665 355 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 CALCOCO1Q9P1Z2 691 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 NUDT5Q9UKK9 219 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 EFR3BQ9Y2G0 817 aa19.5■□□□□ 0.71
EXOSC3-201ENST00000327304 DAPK3O43293 454 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 TJP3O95049 919 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 HYAL1Q12794 435 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 KCNC3Q14003 757 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 SPOCD1Q6ZMY3 1216 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 SYDE1Q6ZW31 735 aaPredicted RBP19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 TMC8Q8IU68 726 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 ELMOD1Q8N336 334 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 GRK7Q8WTQ7 553 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 OVCA2Q8WZ82 227 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 RNF25Q96BH1 459 aaPredicted RBP19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 CDCA3Q99618 268 aaPredicted RBP19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 TRIM51Q9BSJ1 452 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 TRIM62Q9BVG3 475 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 LRRC3Q9BY71 257 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 DCLK3Q9C098 648 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 IL21Q9HBE4 155 aa19.49■□□□□ 0.71
EXOSC3-201ENST00000327304 HOXA9P31269 272 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 PSEN1P49768 467 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 ATXN1P54253 815 aaKnown RBP19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 TFDP3Q5H9I0 405 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 ZFYVE27Q5T4F4 411 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 TXNRD3NBQ6F5E7 133 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 MFSD7Q6UXD7 560 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 TMEM150AQ86TG1 271 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 TAC4Q86UU9 113 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 PDZD8Q8NEN9 1154 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 DQX1Q8TE96 717 aaKnown RBP19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 CENPIQ92674 756 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 PPP2R3CQ969Q6 453 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 LRCH3Q96II8 777 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 GDAP1L1Q96MZ0 367 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 HCFC1R1Q9NWW0 138 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 CLIC5Q9NZA1 410 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 STAP1Q9ULZ2 295 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 ZNF840PA6NDX5 716 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 ECEL1O95672 775 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 HNRNPA1P09651 372 aaKnown RBP eCLIP19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 RARGP13631 454 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 DESP17661 470 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 HDAC4P56524 1084 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 DDX42Q86XP3 938 aaKnown RBP eCLIP19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 C12orf76Q8N812 135 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 C1orf54Q8WWF1 131 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 CORO1BQ9BR76 489 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 HEMGNQ9BXL5 484 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 FAM129AQ9BZQ8 928 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 CCSER2Q9H7U1 834 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 TRPM5Q9NZQ8 1165 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 UXTQ9UBK9 157 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 DPP7Q9UHL4 492 aa19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 PRRC2BQ5JSZ5 2229 aaKnown RBP19.48■□□□□ 0.71
EXOSC3-201ENST00000327304 SYNJ2BP-COX16A0A087WUM0 186 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 M0QYT0 321 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 LINC01565O15544 149 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 TBX18O95935 607 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms