RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 IFNEQ86WN2 208 aa15.16■□□□□ 0.02
TCOF1-201ENST00000323668 ZC3H15Q8WU90 426 aaKnown RBP15.16■□□□□ 0.02
TCOF1-201ENST00000323668 CLEC4DQ8WXI8 215 aa15.16■□□□□ 0.02
TCOF1-201ENST00000323668 THAP11Q96EK4 314 aa15.16■□□□□ 0.02
TCOF1-201ENST00000323668 MECRQ9BV79 373 aa15.16■□□□□ 0.02
TCOF1-201ENST00000323668 LHX5Q9H2C1 402 aa15.16■□□□□ 0.02
TCOF1-201ENST00000323668 UBA6A0AVT1 1052 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-201ENST00000323668 JCHAINP01591 159 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 MYL4P12829 197 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 ENPEPQ07075 957 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 DGKZQ13574 1117 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 BLMHQ13867 455 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 KIZQ2M2Z5 673 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 FNBP1LQ5T0N5 605 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 SNRNP25Q9BV90 132 aaKnown RBP15.15■□□□□ 0.02
TCOF1-201ENST00000323668 WDCPQ9H6R7 721 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 N4BP2Q86UW6 1770 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-201ENST00000323668 KCNK1O00180 336 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 STMN1P16949 149 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 PTPRAP18433 802 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 MLH1P40692 756 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 PDAP1Q13442 181 aaKnown RBP15.15■□□□□ 0.02
TCOF1-201ENST00000323668 TCEAL1Q15170 157 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 ANO4Q32M45 955 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 ANKRD22Q5VYY1 191 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 PLEKHO2Q8TD55 490 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 FNIP1Q8TF40 1166 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 PPP1R2P1Q96PQ5 205 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 RABGEF1Q9UJ41 708 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 NFICP08651 508 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 RAG1P15918 1043 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 ZBTB41Q5SVQ8 909 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 ABI1Q8IZP0 508 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 APOBEC3GQ9HC16 384 aaKnown RBP15.15■□□□□ 0.02
TCOF1-201ENST00000323668 RRN3P2A6NIE6 340 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 HACD1B0YJ81 288 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 XPO1O14980 1071 aaKnown RBP15.15■□□□□ 0.02
TCOF1-201ENST00000323668 PMPCBO75439 489 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 TGDSO95455 350 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 ANPEPP15144 967 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 AVPR1AP37288 418 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 PCSK7Q16549 785 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 CD101Q93033 1021 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 NMD3Q96D46 503 aaKnown RBP15.15■□□□□ 0.02
TCOF1-201ENST00000323668 CPNE1Q99829 537 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 NCKIPSDQ9NZQ3 722 aa15.15■□□□□ 0.02
TCOF1-201ENST00000323668 MAGEB16A2A368 324 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 ABLIM1O14639 778 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 F9P00740 461 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 MPOP05164 745 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 HDAC4P56524 1084 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 PRKAA1Q13131 559 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 MFN1Q8IWA4 741 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 ACMSDQ8TDX5 336 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 CDT1Q9H211 546 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 XPNPEP1Q9NQW7 623 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 TNFSF13BQ9Y275 285 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 KIF13AQ9H1H9 1805 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 BIRC5O15392 142 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 NCAM2O15394 837 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 SERPINA6P08185 405 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 ACO1P21399 889 aaKnown RBP15.14■□□□□ 0.01
TCOF1-201ENST00000323668 PCSK1P29120 753 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 NAB1Q13506 487 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 PTK2BQ14289 1009 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 NOMO1Q15155 1222 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 FBXO47Q5MNV8 452 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 FAM183BPQ6ZVS7 135 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 CPXM1Q96SM3 734 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 CHST12Q9NRB3 414 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 F8W8V4 182 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 TPP1O14773 563 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 HNRNPCP07910 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
TCOF1-201ENST00000323668 PSMC3P17980 439 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 TFE3P19532 575 aaPredicted RBP15.14■□□□□ 0.01
TCOF1-201ENST00000323668 WASHC5Q12768 1159 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 GSTA3Q16772 222 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 OLFML2BQ68BL8 750 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 C16orf87Q6PH81 154 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 ULK2Q8IYT8 1036 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 XPNPEP3Q9NQH7 507 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 AAR2Q9Y312 384 aaKnown RBP15.14■□□□□ 0.01
TCOF1-201ENST00000323668 PLLPQ9Y342 182 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 A0A0A0MRY4 1105 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 E2F6O75461 281 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 HADHAP40939 763 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 SPANXN3Q5MJ09 141 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 TMCO4Q5TGY1 634 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 GRAMD4Q6IC98 578 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 AMIGO3Q86WK7 504 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 PABPC5Q96DU9 382 aaKnown RBP15.14■□□□□ 0.01
TCOF1-201ENST00000323668 FAR2Q96K12 515 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 SPATA13Q96N96 652 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 EBF2Q9HAK2 575 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 IRAK4Q9NWZ3 460 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 STX18Q9P2W9 335 aaKnown RBP15.14■□□□□ 0.01
TCOF1-201ENST00000323668 RIPK3Q9Y572 518 aa15.14■□□□□ 0.01
TCOF1-201ENST00000323668 C4AP0C0L4 1744 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 C4BP0C0L5 1744 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms