RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 RNASEH2BQ5TBB1 312 aaKnown RBP27.36■■□□□ 1.97
TM6SF1-202ENST00000322019 DENND2CQ68D51 928 aa27.36■■□□□ 1.97
TM6SF1-202ENST00000322019 SCD5Q86SK9 330 aa27.36■■□□□ 1.97
TM6SF1-202ENST00000322019 VSIG1Q86XK7 387 aa27.36■■□□□ 1.97
TM6SF1-202ENST00000322019 USP29Q9HBJ7 922 aa27.36■■□□□ 1.97
TM6SF1-202ENST00000322019 GOLGA6CA6NDK9 693 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 KCNN4O15554 427 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 GOLGA6DP0CG33 693 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 CAV1Q03135 178 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 DNAJC21Q5F1R6 531 aaKnown RBP27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 CNKSR3Q6P9H4 555 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 C11orf49Q9H6J7 331 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 OSER1Q9NX31 292 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 GOLGA6AQ9NYA3 693 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 FBXW11Q9UKB1 542 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 PCDHB5Q9Y5E4 795 aa27.35■■□□□ 1.97
TM6SF1-202ENST00000322019 TRIM43BA6NCK2 446 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 PARNO95453 639 aaKnown RBP27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 CSF2RAP15509 400 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 IFFO1Q0D2I5 559 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 NFE2Q16621 373 aaPredicted RBP27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 RNF19BQ6ZMZ0 732 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 BBOF1Q8ND07 529 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 EXOC4Q96A65 974 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 TRIM43Q96BQ3 446 aaPredicted RBP27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 SFMBT1Q9UHJ3 866 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 TCRBV7S3A2A0A539 114 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 GOLGA8KD6RF30 607 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 MSI1O43347 362 aaKnown RBP27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 DGKIO75912 1065 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 VNN2O95498 520 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 RPL17P18621 184 aaKnown RBP27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 DEFB103AP81534 67 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 DNAJC5GQ8N7S2 189 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 ARMC5Q96C12 935 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 TMEM175Q9BSA9 504 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 VN1R3Q9BXE9 311 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 TKTL2Q9H0I9 626 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 DTLQ9NZJ0 730 aa27.34■■□□□ 1.97
TM6SF1-202ENST00000322019 A0A1W2PQH9 124 aa27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 SMIM23A6NLE4 172 aa27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 ZNF487B1APH4 448 aa27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 ADAM12O43184 909 aa27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 HSPA8P11142 646 aaKnown RBP27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 ALDH7A1P49419 539 aaKnown RBP27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 LBX1P52954 281 aa27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 KYNUQ16719 465 aa27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 TP53INP2Q8IXH6 220 aa27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 CPT1BQ92523 772 aa27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 PGAP3Q96FM1 320 aaPredicted RBP27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 CWH43Q9H720 699 aa27.33■■□□□ 1.97
TM6SF1-202ENST00000322019 ERICH4A6NGS2 130 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 MFSD11O43934 449 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 BANF1O75531 89 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 PPARDQ03181 441 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 ZCCHC9Q8N567 271 aaKnown RBP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 PRCCQ92733 491 aaPredicted RBP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 FUBP3Q96I24 572 aaKnown RBP eCLIP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 C9orf72Q96LT7 481 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 RBM15Q96T37 977 aaKnown RBP eCLIP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 SEPT5Q99719 369 aaPredicted RBP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 TTPALQ9BTX7 342 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 WDCPQ9H6R7 721 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 TMBIM4Q9HC24 238 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 COL4A6Q14031 1691 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 OR6C75A6NL08 312 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 C2CD2LO14523 706 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 BASP1P80723 227 aaKnown RBP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 FASTKD3Q14CZ7 662 aaKnown RBP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 BTBD8Q5XKL5 378 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 PSTKQ8IV42 348 aaKnown RBP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 SCML4Q8N228 414 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 RNF34Q969K3 372 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 BCCIPQ9P287 314 aaKnown RBP eCLIP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 FARP1Q9Y4F1 1045 aaPredicted RBP27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 MYO16Q9Y6X6 1858 aa27.32■■□□□ 1.96
TM6SF1-202ENST00000322019 MTMR11A4FU01 709 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 EEF2KO00418 725 aaKnown RBP27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 MYZAPP0CAP1 466 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 ACRP10323 421 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 KRT71Q3SY84 523 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 SPDYCQ5MJ68 293 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 KCNT2Q6UVM3 1135 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 RFX8Q6ZV50 586 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 CASP10Q92851 521 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 PSD3Q9NYI0 1048 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 CDY1Q9Y6F8 540 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 MRPL42Q9Y6G3 142 aaKnown RBP27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 H3BRJ5 948 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 NUDT17P0C025 328 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 CXCR3P49682 368 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 MGAT5BQ3V5L5 792 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 FAXCQ5TGI0 409 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 VSTM1Q6UX27 236 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 NUP93Q8N1F7 819 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 NTAN1Q96AB6 310 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 SLC9A7Q96T83 725 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 NINJ2Q9NZG7 142 aa27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 COL4A4P53420 1690 aaPredicted RBP27.31■■□□□ 1.96
TM6SF1-202ENST00000322019 TBC1D4O60343 1298 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms