RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 JCHAINP01591 159 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 LYNP07948 512 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 ANPEPP15144 967 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 PTGIRP43119 386 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 PPM1FP49593 454 aaPredicted RBP15.72■□□□□ 0.11
VARS2-201ENST00000321897 ATXN1P54253 815 aaKnown RBP15.72■□□□□ 0.11
VARS2-201ENST00000321897 CDK16Q00536 496 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 PDK4Q16654 411 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 BOLA3Q53S33 107 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 UPF3AQ9H1J1 476 aaKnown RBP15.72■□□□□ 0.11
VARS2-201ENST00000321897 IL1RL2Q9HB29 575 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 BTBD7Q9P203 1132 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 TAGLN3Q9UI15 199 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 PTPRJQ12913 1337 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 A0A0B4J269 797 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 WDR27A2RRH5 827 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 TNPO2O14787 897 aaKnown RBP15.71■□□□□ 0.11
VARS2-201ENST00000321897 VDRP11473 427 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 ADORA2AP29274 412 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 TAF1CQ15572 869 aaPredicted RBP15.71■□□□□ 0.11
VARS2-201ENST00000321897 C9orf131Q5VYM1 1079 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 ERO1BQ86YB8 467 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 MIB1Q86YT6 1006 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 HAUS8Q9BT25 410 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 HMGXB4Q9UGU5 601 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 MYH11P35749 1972 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 CLDN5O00501 218 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 TBX10O75333 385 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 GRIK1P39086 918 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 DRG2P55039 364 aaKnown RBP15.71■□□□□ 0.11
VARS2-201ENST00000321897 GDF10P55107 478 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 WDR4P57081 412 aaKnown RBP15.71■□□□□ 0.11
VARS2-201ENST00000321897 GRIK3Q13003 919 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 UBAP2LQ14157 1087 aaKnown RBP15.71■□□□□ 0.11
VARS2-201ENST00000321897 KIF19Q2TAC6 998 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 RBM44Q6ZP01 1051 aaKnown RBP15.71■□□□□ 0.11
VARS2-201ENST00000321897 AFAP1L2Q8N4X5 818 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 LGMNQ99538 433 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 DMAP1Q9NPF5 467 aaPredicted RBP15.71■□□□□ 0.11
VARS2-201ENST00000321897 ZDHHC18Q9NUE0 388 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 STXBP5LQ9Y2K9 1186 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 ZNF541Q9H0D2 1346 aa15.71■□□□□ 0.11
VARS2-201ENST00000321897 AKAP10O43572 662 aa15.71■□□□□ 0.1
VARS2-201ENST00000321897 IL18RAPO95256 599 aa15.71■□□□□ 0.1
VARS2-201ENST00000321897 ASS1P00966 412 aaKnown RBP15.71■□□□□ 0.1
VARS2-201ENST00000321897 NEK3P51956 506 aa15.71■□□□□ 0.1
VARS2-201ENST00000321897 SNAPC2Q13487 334 aa15.71■□□□□ 0.1
VARS2-201ENST00000321897 DPYSL3Q14195 570 aa15.71■□□□□ 0.1
VARS2-201ENST00000321897 TRABD2AQ86V40 505 aa15.71■□□□□ 0.1
VARS2-201ENST00000321897 KATNAL2Q8IYT4 538 aa15.71■□□□□ 0.1
VARS2-201ENST00000321897 DIS3LQ8TF46 1054 aaKnown RBP15.71■□□□□ 0.1
VARS2-201ENST00000321897 KCNK16Q96T55 309 aa15.71■□□□□ 0.1
VARS2-201ENST00000321897 CADM1Q9BY67 442 aaKnown RBP15.71■□□□□ 0.1
VARS2-201ENST00000321897 ZNF212Q9UDV6 495 aa15.71■□□□□ 0.1
VARS2-201ENST00000321897 PHRF1Q9P1Y6 1649 aaKnown RBP15.71■□□□□ 0.1
VARS2-201ENST00000321897 SPATA31C2B4DYI2 1134 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 MAGEB2O15479 319 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 POMCP01189 267 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 C4BPAP04003 597 aaKnown RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 STIP1P31948 543 aaKnown RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 NME5P56597 212 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 PLIN5Q00G26 463 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 TSPY1Q01534 308 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 ZNF786Q8N393 782 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 C18orf25Q96B23 403 aaPredicted RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 ZMAT2Q96NC0 199 aaKnown RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 SRPK1Q96SB4 655 aaKnown RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 PAIP1Q9H074 479 aaKnown RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 ING2Q9H160 280 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 MMADHCQ9H3L0 296 aaPredicted RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 ZNF214Q9UL59 606 aaPredicted RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 DOLKQ9UPQ8 538 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 ENDOD1O94919 500 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 MMP8P22894 467 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 MRPS22P82650 360 aaKnown RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 NRF1Q16656 503 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 PARP6Q2NL67 630 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 FAM117BQ6P1L5 589 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 FAM183BPQ6ZVS7 135 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 PTAR1Q7Z6K3 402 aaPredicted RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 APLFQ8IW19 511 aaPredicted RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 ZCCHC9Q8N567 271 aaKnown RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 CDC26Q8NHZ8 85 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 ACO2Q99798 780 aaKnown RBP15.7■□□□□ 0.1
VARS2-201ENST00000321897 TBC1D23Q9NUY8 699 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 NWD2Q9ULI1 1742 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 VAV1P15498 845 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 MGAT1P26572 445 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 WNT7BP56706 349 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 SLC5A9Q2M3M2 681 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 BTBD8Q5XKL5 378 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 DEFB106AQ8N104 65 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 KLRG1Q96E93 195 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 NUP188Q5SRE5 1749 aa15.7■□□□□ 0.1
VARS2-201ENST00000321897 hCG_1818297A0A087WSY0 165 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 DCXO43602 365 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 FARP2O94887 1054 aaPredicted RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 PKNOX1P55347 436 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ITGA9Q13797 1035 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 MPP2Q14168 576 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms