RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 WDR60Q8WVS4 1066 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 FSD1LQ9BXM9 530 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 CEP41Q9BYV8 373 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 DEFB129Q9H1M3 183 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 DPP3Q9NY33 737 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 GGA3Q9NZ52 723 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 AKAP10O43572 662 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 TIMM44O43615 452 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 TRIM13O60858 407 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 LINGO3P0C6S8 592 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 RGS2P41220 211 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 ENPEPQ07075 957 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 TTLL4Q14679 1199 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 LIN52Q52LA3 116 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 PRAMEF18Q5VWM3 479 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 SNX32Q86XE0 403 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 CHST13Q8NET6 341 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 LRRN4Q8WUT4 740 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 DCAKDQ8WVC6 231 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 HTR3CQ8WXA8 447 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 USP13Q92995 863 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 CPXM1Q96SM3 734 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 DDX18Q9NVP1 670 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 CLUHO75153 1309 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 IRS2Q9Y4H2 1338 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 VNN1O95497 513 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 FAM58BPP0C7Q3 252 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 CYP2C8P10632 490 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 CRADDP78560 199 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 GRIK3Q13003 919 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 FKBP1CQ5VVH2 108 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 LPCAT4Q643R3 524 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 SLC39A4Q6P5W5 647 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 CES3Q6UWW8 571 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 HACE1Q8IYU2 909 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 FNIP1Q8TF40 1166 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 CLEC4DQ8WXI8 215 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 CDRT15Q96T59 188 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 S100A14Q9HCY8 104 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 PFDN4Q9NQP4 134 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 PACSIN3Q9UKS6 424 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 ARAP2Q8WZ64 1704 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 SMIM31A0A1B0GVY4 71 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 C3orf70A6NLC5 250 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 SEC24DO94855 1032 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 TNFAIP8O95379 198 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 PMLP29590 882 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 ATICP31939 592 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 GLRBP48167 497 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 YWHAZP63104 245 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 MRPS22P82650 360 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 PRKD1Q15139 912 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 ADRM1Q16186 407 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 THAP11Q96EK4 314 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 TNIP3Q96KP6 325 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 NDNQ99608 321 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 CCDC28BQ9BUN5 200 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 BHMG1C9JSJ3 638 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 HBP1O60381 514 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 H2AFYO75367 372 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 CSDE1O75534 798 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 ZNF189O75820 626 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 YY1P25490 414 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 ABCE1P61221 599 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 MSS51Q4VC12 460 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 CGB2Q6NT52 195 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 LAYNQ6UX15 382 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 SCUBE3Q8IX30 993 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 ACMSDQ8TDX5 336 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 SGF29Q96ES7 293 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 NRBF2Q96F24 287 aa13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 STN1Q9H668 368 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-202ENST00000321117 TCRBV7S3A2A0A539 114 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 UQCRBP14927 111 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 MLH1P40692 756 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ACADSBP45954 432 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ALDH1A3P47895 512 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 MPP3Q13368 585 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 UNC5AQ6ZN44 842 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 TFAP2BQ92481 460 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 PTPRN2Q92932 1015 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 CCDC138Q96M89 665 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 PRPF18Q99633 342 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 SNRNP25Q9BV90 132 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 A0A096LPK6 155 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ACKR2O00590 384 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 PGAM1P18669 254 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 IL10P22301 178 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 GABRB2P47870 512 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 STX5Q13190 355 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 DGKZQ13574 1117 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 PTK2BQ14289 1009 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ZC3H12AQ5D1E8 599 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms