RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 RCN3Q96D15 328 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 C7orf26Q96N11 449 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 FRMD8Q9BZ67 464 aaPredicted RBP17.09■□□□□ 0.33
PACS1-201ENST00000320580 AFG3L2Q9Y4W6 797 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 PFDN6O15212 129 aa17.08■□□□□ 0.33
PACS1-201ENST00000320580 HLA-DRAP01903 254 aa17.08■□□□□ 0.33
PACS1-201ENST00000320580 ALAS1P13196 640 aa17.08■□□□□ 0.33
PACS1-201ENST00000320580 RELAQ04206 551 aa17.08■□□□□ 0.33
PACS1-201ENST00000320580 GABPAQ06546 454 aa17.08■□□□□ 0.33
PACS1-201ENST00000320580 ABCB5Q2M3G0 1257 aa17.08■□□□□ 0.33
PACS1-201ENST00000320580 DHRSXQ8N5I4 330 aa17.08■□□□□ 0.33
PACS1-201ENST00000320580 SKA1Q96BD8 255 aa17.08■□□□□ 0.33
PACS1-201ENST00000320580 SLC8A2Q9UPR5 921 aa17.08■□□□□ 0.33
PACS1-201ENST00000320580 ANGPT2O15123 496 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 IDH3BO43837 385 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 GSTT2P0CG29 244 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 GSTT2BP0CG30 244 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 TAP1Q03518 808 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 TLR1Q15399 786 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 FAM102AQ5T9C2 384 aaPredicted RBP17.08■□□□□ 0.32
PACS1-201ENST00000320580 GPD1LQ8N335 351 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 ZNF280CQ8ND82 737 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 TGFB1I1O43294 461 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 MED7O43513 233 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 H6PDO95479 791 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 CHEK2O96017 543 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 GSNP06396 782 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 TBXAS1P24557 533 aaPredicted RBP17.08■□□□□ 0.32
PACS1-201ENST00000320580 RPL22P35268 128 aaKnown RBP17.08■□□□□ 0.32
PACS1-201ENST00000320580 GNA12Q03113 381 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 OTUD3Q5T2D3 398 aaPredicted RBP17.08■□□□□ 0.32
PACS1-201ENST00000320580 KYAT3Q6YP21 454 aaKnown RBP17.08■□□□□ 0.32
PACS1-201ENST00000320580 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
PACS1-201ENST00000320580 LINC00854A0A1B0GVQ3 168 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 CCDC78A2IDD5 438 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 H0YCG3 227 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 P4HA1P13674 534 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 SULT2A1Q06520 285 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 VWA5B1Q5TIE3 1220 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 CHSY1Q86X52 802 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 PCYOX1LQ8NBM8 494 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 GAB3Q8WWW8 586 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 MSTO1Q9BUK6 570 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 TLE6Q9H808 572 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 SEPT9Q9UHD8 586 aaPredicted RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 ROBO1Q9Y6N7 1651 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 MYL4P12829 197 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 ARL4AP40617 200 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 KPNA2P52292 529 aaKnown RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 PRKD1Q15139 912 aaPredicted RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 MTX3Q5HYI7 312 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 ATG14Q6ZNE5 492 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 ANKS1BQ7Z6G8 1248 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 ZNF555Q8NEP9 628 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 MARK4Q96L34 752 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 DEPDC7Q96QD5 511 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 AVENQ9NQS1 362 aaPredicted RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 PLLPQ9Y342 182 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 A0A0B4J269 797 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 TBC1D4O60343 1298 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 CDK9P50750 372 aaKnown RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 GLRA4Q5JXX5 417 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 CCDC60Q8IWA6 550 aaPredicted RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 NLGN1Q8N2Q7 840 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 RYBPQ8N488 228 aaPredicted RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 SUN5Q8TC36 379 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 SGF29Q96ES7 293 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 SERAC1Q96JX3 654 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 AGAP3Q96P47 875 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 PLK2Q9NYY3 685 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 APOL1O14791 398 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 RGL2O15211 777 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 CYP1A1P04798 512 aaPredicted RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 EIF2S1P05198 315 aaKnown RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 ACOT2P49753 483 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 ADGRE1Q14246 886 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 TRIM60Q495X7 471 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 PLEKHG4Q58EX7 1191 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 ZBTB33Q86T24 672 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 CDKL3Q8IVW4 592 aaPredicted RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 SSU72Q9NP77 194 aaKnown RBP17.07■□□□□ 0.32
PACS1-201ENST00000320580 ABCB10Q9NRK6 738 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 SYBUQ9NX95 663 aa17.07■□□□□ 0.32
PACS1-201ENST00000320580 FASP25445 335 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 ACADVLP49748 655 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 SLC18A1P54219 525 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 AGKQ53H12 422 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 FAM71AQ8IYT1 594 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 USP33Q8TEY7 942 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 USP29Q9HBJ7 922 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 F8VP50 259 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 BPGMP07738 259 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 TKTP29401 623 aaKnown RBP17.06■□□□□ 0.32
PACS1-201ENST00000320580 GTF2H1P32780 548 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 KPNA1P52294 538 aaPredicted RBP17.06■□□□□ 0.32
PACS1-201ENST00000320580 KLF10Q13118 480 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 CHURC1Q8WUH1 139 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 SLC10A4Q96EP9 437 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 PRICKLE1Q96MT3 831 aaPredicted RBP17.06■□□□□ 0.32
PACS1-201ENST00000320580 RIOX1Q9H6W3 641 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms