RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 SLC14A2Q15849 920 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PPP2R5EQ16537 467 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 HSF5Q4G112 596 aaPredicted RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 SEZ6Q53EL9 994 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 MDH1BQ5I0G3 518 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 HABP4Q5JVS0 413 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PRSS36Q5K4E3 855 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 NUGGCQ68CJ6 796 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 CES5AQ6NT32 575 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 ZSCAN30Q86W11 494 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 ERICH1Q86X53 443 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TMEM139Q8IV31 216 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 MCOLN2Q8IZK6 566 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 SIX6OS1Q8N1H7 587 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 C1orf216Q8TAB5 229 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 CENPIQ92674 756 aaPredicted RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TP53INP1Q96A56 240 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PKNOX2Q96KN3 472 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 C1orf74Q96LT6 269 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 RUNDC3BQ96NL0 473 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 C17orf80Q9BSJ5 609 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 MED10Q9BTT4 135 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 DDX23Q9BUQ8 820 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 BRD8Q9H0E9 1235 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TLE6Q9H808 572 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 NHEJ1Q9H9Q4 299 aaPredicted RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 POPDC2Q9HBU9 364 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 LRRC4Q9HBW1 653 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.44□□□□□ -1.867e-6■■■■■ 74.5
SCAMP1-201ENST00000320280 KRT82Q9NSB4 513 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TRPM5Q9NZQ8 1165 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TBC1D14Q9P2M4 693 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 ARHGAP26Q9UNA1 814 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 CDY1Q9Y6F8 540 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 EPN1Q9Y6I3 576 aaPredicted RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 DOCK4Q8N1I0 1966 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 NOTCH4Q99466 2003 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PIK3R2O00459 728 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 MDM4O15151 490 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TGM5O43548 720 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 ZBED1O96006 694 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 FAM157BP0CG42 384 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PRLRP16471 622 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 CHRNB2P17787 502 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 MATKP42679 507 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 GATMP50440 423 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 FXR1P51114 621 aaKnown RBP eCLIP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 COG7P83436 770 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 AMPD2Q01433 879 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 EIF4EBP2Q13542 120 aaPredicted RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC12A1Q13621 1099 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TRIP4Q15650 581 aaPredicted RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC39A12Q504Y0 691 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 CYP4A22Q5TCH4 519 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 ALKBH5Q6P6C2 394 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 WDR59Q6PJI9 974 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PAQR9Q6ZVX9 377 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 SND1Q7KZF4 910 aaKnown RBP eCLIP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 OTOP3Q7RTS5 596 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 NOP9Q86U38 636 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TMC8Q8IU68 726 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 KDM1BQ8NB78 822 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 MRPS31Q92665 395 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 SECISBP2LQ93073 1101 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 EEF2KMTQ96G04 330 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 ALS2CR12Q96Q35 445 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 HAPLN3Q96S86 360 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 LRRC3Q9BY71 257 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC2A11Q9BYW1 496 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 LACRTQ9GZZ8 138 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 IKZF4Q9H2S9 585 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TASP1Q9H6P5 420 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 GOLGA2P5Q9HBQ8 144 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 DNAJB12Q9NXW2 375 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 IGSF9Q9P2J2 1179 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PPARGC1AQ9UBK2 798 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC12A6Q9UHW9 1150 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 CD207Q9UJ71 328 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PLXND1Q9Y4D7 1925 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TRAV19A0A0A6YYK7 116 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 E2F8A0AVK6 867 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 LCHNA4D1U4 455 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 WASH4PA8MWX3 477 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 PRRG1O14668 218 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 GRM6O15303 877 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 CYP26A1O43174 497 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 LUC7L3O95232 432 aaKnown RBP3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 OAS1P00973 400 aaKnown RBP3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 C8AP07357 584 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 KRT7P08729 469 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 HOXC13P31276 330 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 OR1D2P34982 312 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 SOX11P35716 441 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 ETFBP38117 255 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 CETN2P41208 172 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 ZNF143P52747 638 aaPredicted RBP3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 DMC1Q14565 340 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 PDK2Q15119 407 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 PDGFRLQ15198 375 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms