RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 DARSP14868 501 aaKnown RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 SLC47A2Q86VL8 602 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 UBE2J2Q8N2K1 259 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 ZNF221Q9UK13 617 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 RIPK2O43353 540 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 EPS8Q12929 822 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 SLC9A4Q6AI14 798 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 TCP10LQ8TDR4 215 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 CCDC17Q96LX7 622 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 A0A1W2PQJ5 194 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 MAGEA2P43356 314 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 PLK1P53350 603 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 SLC25A3Q00325 362 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 LRRC17Q8N6Y2 441 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 SYNDIG1Q9H7V2 258 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 UBA2Q9UBT2 640 aaPredicted RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 TMCC2O75069 709 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 PON1P27169 355 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 GTF2H1P32780 548 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 YWHAZP63104 245 aaKnown RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 DHRSXQ8N5I4 330 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 ORAI2Q96SN7 254 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 FAM220BPB1ANY3 271 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 PPP1R3GB7ZBB8 358 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 BST2Q10589 180 aaKnown RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 TMEM132DQ14C87 1099 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 IQCF2Q8IXL9 164 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 LSM14AQ8ND56 463 aaKnown RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 C9orf16Q9BUW7 83 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 TUBGCP4Q9UGJ1 667 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 C15orf38-AP3S2A0A0A6YYH1 394 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 TNPO2O14787 897 aaKnown RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 CCNA2P20248 432 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 PTSQ03393 145 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 C6orf52Q5T4I8 152 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 ZFP1Q6P2D0 407 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 ARPINQ7Z6K5 226 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 SPPL2AQ8TCT8 520 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 WDR41Q9HAD4 459 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 LOC110117498-PIK3R3F6TDL0 507 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 PBLDP30039 288 aaPredicted RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 TNFAIP2Q03169 654 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 HPS6Q86YV9 775 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 TMPRSS6Q8IU80 811 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 FAM172AQ8WUF8 416 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 NRP2O60462 931 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 SLC26A3P40879 764 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 CLK2P49760 499 aaKnown RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.95□□□□□ -0.98
USF3-201ENST00000316407 GOLGA7BQ2TAP0 167 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 PDXKO00764 312 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 RTN3O95197 1032 aaPredicted RBP8.95□□□□□ -0.98
USF3-201ENST00000316407 TMEM62Q0P6H9 643 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 DHDDSQ86SQ9 333 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 CYP4Z1Q86W10 505 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 TBC1D24Q9ULP9 559 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 ZHX2Q9Y6X8 837 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 MGAT4DA6NG13 374 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 CYP2C8P10632 490 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 GHRP10912 638 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 RARGP13631 454 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 SCRN3Q0VDG4 424 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 BROXQ5VW32 411 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 ABRAXAS1Q6UWZ7 409 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 RAB42Q8N4Z0 105 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 FOXP3Q9BZS1 431 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 OSGEPQ9NPF4 335 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 BAIAP2Q9UQB8 552 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 GCLCP48506 637 aaPredicted RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 EDRF1Q3B7T1 1238 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 SLCO6A1Q86UG4 719 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 AP5Z1O43299 807 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 NCAM1P13591 858 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 C8orf59Q8N0T1 100 aaPredicted RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 ITFG1Q8TB96 612 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 SLC4A9Q96Q91 983 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 CDK16Q00536 496 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 AP3B2Q13367 1082 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 OR8H1Q8NGG4 311 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 DNAJC1Q96KC8 554 aaKnown RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 PHF11Q9UIL8 331 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 SDR42E2A6NKP2 422 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 SOAT2O75908 522 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 KDM4BO94953 1096 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 ADRA1DP25100 572 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 ALYREFQ86V81 257 aaKnown RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 CENPIQ92674 756 aaPredicted RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 CAVIN3Q969G5 261 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 COMMD9Q9P000 198 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 EIF2S3P41091 472 aaKnown RBP8.94□□□□□ -0.98
USF3-201ENST00000316407 IST1P53990 364 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 TMEM143Q96AN5 459 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.94□□□□□ -0.981e-5■□□□□ 8.9
USF3-201ENST00000316407 ZMYM5Q9UJ78 669 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 CDC42BPGQ6DT37 1551 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 DPPA5A6NC42 116 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 PRR23AA6NEV1 266 aa8.94□□□□□ -0.98
USF3-201ENST00000316407 RGS4P49798 205 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms