RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 F8W8V4 182 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 PPEF2O14830 753 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 DUSP11O75319 330 aaKnown RBP17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 CIB2O75838 187 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 HTRA3P83110 453 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 ZNF252P-AS1Q0IIN9 211 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 PTK7Q13308 1070 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 TMEM132DQ14C87 1099 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 SNX17Q15036 470 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 TFDP3Q5H9I0 405 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 C6orf163Q5TEZ5 329 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 TRIM72Q6ZMU5 477 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 PCGF5Q86SE9 256 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 PHF13Q86YI8 300 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 APOPT1Q96IL0 206 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 TWNKQ96RR1 684 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 THTPAQ9BU02 230 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 SPATA16Q9BXB7 569 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 PPARGC1AQ9UBK2 798 aaKnown RBP17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 TCRBV7S3A2A0A539 114 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 NDC80O14777 642 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 PYGBP11216 843 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 DPH6Q7L8W6 267 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 SLC25A41Q8N5S1 370 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 C18orf25Q96B23 403 aaPredicted RBP17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 VCPIP1Q96JH7 1222 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 MCEEQ96PE7 176 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 UBE2OQ9C0C9 1292 aaKnown RBP17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 CNTN6Q9UQ52 1028 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 CHMP2BQ9UQN3 213 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 PYGLP06737 847 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 CTSHP09668 335 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 AP2B1P63010 937 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 CDC16Q13042 620 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 ZNF667Q5HYK9 610 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 MFSD14CQ5VZR4 134 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 ARMC3Q5W041 872 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 NET1Q7Z628 596 aaPredicted RBP17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 ULK2Q8IYT8 1036 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 ARHGAP18Q8N392 663 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 NAT8LQ8N9F0 302 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 CAPNS2Q96L46 248 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 IKBKGQ9Y6K9 419 aa17.79■□□□□ 0.44
SCAMP4-201ENST00000316097 IQANK1A0A1B0GTG1 560 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 TMEM63AO94886 807 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 ZNF132P52740 706 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 FAAP100Q0VG06 881 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 TRMT5Q32P41 509 aaKnown RBP17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 SLC27A1Q6PCB7 646 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 DPP3Q9NY33 737 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 STRIP2Q9ULQ0 834 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 PPM1HQ9ULR3 514 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 ETS2P15036 469 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 CD19P15391 556 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 CDKN2BP42772 138 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 TBC1D25Q3MII6 688 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 LIN52Q52LA3 116 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 C1orf146Q5VVC0 180 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 MYLK4Q86YV6 388 aaPredicted RBP17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 SLC35B2Q8TB61 432 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 HPDLQ96IR7 371 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 NDNQ99608 321 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 TUBGCP4Q9UGJ1 667 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 SLC7A8Q9UHI5 535 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 Q9Y3F1 56 aa17.78■□□□□ 0.44
SCAMP4-201ENST00000316097 ANK1P16157 1881 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 TMEM191CA6NGB0 347 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 CAPN14A8MX76 684 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 RNASEH1O60930 286 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 TM7SF2O76062 418 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 RANBP1P43487 201 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 ACTR3P61158 418 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 OTUD4Q01804 1114 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 OGDHQ02218 1023 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 DEFB115Q30KQ5 88 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 LRRC23Q53EV4 343 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 CFAP157Q5JU67 520 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 FAM91A1Q658Y4 838 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 GDF6Q6KF10 455 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 ACTL9Q8TC94 416 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 CENPKQ9BS16 269 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 MECRQ9BV79 373 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 VCX3BQ9H321 246 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 ASB7Q9H672 318 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 VCX3AQ9NNX9 186 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 INHBAP08476 426 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 CRABP2P29373 138 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 RPL22P35268 128 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 CDK7P50613 346 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 DCUN1D2Q6PH85 259 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 ARID3BQ8IVW6 561 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 PDIK1LQ8N165 341 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 IQCGQ9H095 443 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 OCEL1Q9H607 264 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 CNTN3Q9P232 1028 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 XPO7Q9UIA9 1087 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 PLA2G4CQ9UP65 541 aa17.77■□□□□ 0.44
SCAMP4-201ENST00000316097 SPECC1L-ADORA2AF8WAN1 911 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 PRKAR2AP13861 404 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms