RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 C8AP07357 584 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 HNRNPA1P09651 372 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMCO3-201ENST00000316048 SERPINA4P29622 427 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 PPP2R1AP30153 589 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 POLE2P56282 527 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 SF3A3Q12874 501 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMCO3-201ENST00000316048 HYIQ5T013 277 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 ERICH6BQ5W0A0 696 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 GRHL2Q6ISB3 625 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 IZUMO1Q8IYV9 350 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 PCYOX1LQ8NBM8 494 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 SLC22A17Q8WUG5 538 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 HMGB4Q8WW32 186 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 LPIN2Q92539 896 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 GLG1Q92896 1179 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 ZDHHC12Q96GR4 267 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 WDYHV1Q96HA8 205 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 ZNF668Q96K58 619 aaPredicted RBP4.54□□□□□ -1.68
SMCO3-201ENST00000316048 DCLRE1CQ96SD1 692 aaKnown RBP4.54□□□□□ -1.68
SMCO3-201ENST00000316048 AGXT2Q9BYV1 514 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 ARHGAP39Q9C0H5 1083 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 SWAP70Q9UH65 585 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 JAG2Q9Y219 1238 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 DRG1Q9Y295 367 aaKnown RBP4.54□□□□□ -1.68
SMCO3-201ENST00000316048 DNAJC16Q9Y2G8 782 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 INSRP06213 1382 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 DYTNA2CJ06 578 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 DIRC3C9JPN6 131 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 TRIAP1O43715 76 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 XBP1P17861 261 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 NR4A1P22736 598 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 VAV2P52735 878 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 MTAPQ13126 283 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 RESTQ13127 1097 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 TRPC3Q13507 836 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 EFR3AQ14156 821 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 WDR43Q15061 677 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMCO3-201ENST00000316048 SMAD1Q15797 465 aaKnown RBP4.54□□□□□ -1.68
SMCO3-201ENST00000316048 UBXN11Q5T124 520 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 SLC9C2Q5TAH2 1124 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 GLB1LQ6UWU2 654 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 RSC1A1Q92681 617 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 OSBPL9Q96SU4 736 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 ADOQ96SZ5 270 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 VN1R3Q9BXE9 311 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 ABHD16BQ9H3Z7 469 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 AKIP1Q9NQ31 210 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 NEU2Q9Y3R4 380 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 COL15A1P39059 1388 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 RIMS2Q9UQ26 1411 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 ALADP13716 330 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 ATXN1P54253 815 aaKnown RBP4.53□□□□□ -1.68
SMCO3-201ENST00000316048 TLE2Q04725 743 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 RNASELQ05823 741 aaKnown RBP4.53□□□□□ -1.68
SMCO3-201ENST00000316048 CHRNDQ07001 517 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 MAPK7Q13164 816 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 TOB2Q14106 344 aaPredicted RBP4.53□□□□□ -1.68
SMCO3-201ENST00000316048 CSHL1Q14406 222 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 MAP3K21Q5TCX8 1036 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 LCNL1Q6ZST4 164 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 COLGALT2Q8IYK4 626 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 TMEM57Q8N5G2 664 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 MYCBPAPQ8TBZ2 947 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 R3HDM4Q96D70 268 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 GPR63Q9BZJ6 419 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 INO80BQ9C086 356 aaPredicted RBP4.53□□□□□ -1.68
SMCO3-201ENST00000316048 BLOC1S4Q9NUP1 217 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 NUDCQ9Y266 331 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 TNRQ92752 1358 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 A2ML1A8K2U0 1454 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 CGNL1Q0VF96 1302 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 QRICH2Q9H0J4 1663 aa4.53□□□□□ -1.68
SMCO3-201ENST00000316048 YTHDC2Q9H6S0 1430 aaKnown RBP4.53□□□□□ -1.68
SMCO3-201ENST00000316048 SLC38A8A6NNN8 435 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 VWC2LB2RUY7 222 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 B4E171 279 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 TRIM24O15164 1050 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 CA12O43570 354 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ZNF623O75123 536 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 HEXIM1O94992 359 aaKnown RBP4.52□□□□□ -1.69
SMCO3-201ENST00000316048 NDUFA10O95299 355 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 FESP07332 822 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 EPHA3P29320 983 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ELF1P32519 619 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 TSPAN7P41732 249 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 TIRAPP58753 221 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ADAM17P78536 824 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ACOX1Q15067 660 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 BEAN1Q3B7T3 259 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 RABL3Q5HYI8 236 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ZNF484Q5JVG2 852 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 SFRP4Q6FHJ7 346 aaPredicted RBP4.52□□□□□ -1.69
SMCO3-201ENST00000316048 FAAH2Q6GMR7 532 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ANKS1BQ7Z6G8 1248 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 CAND1Q86VP6 1230 aaKnown RBP4.52□□□□□ -1.69
SMCO3-201ENST00000316048 CPEB3Q8NE35 698 aaKnown RBP4.52□□□□□ -1.69
SMCO3-201ENST00000316048 LINS1Q8NG48 757 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 SSH3Q8TE77 659 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 WDR60Q8WVS4 1066 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 CPT1BQ92523 772 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms