RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 KLF16Q9BXK1 252 aaPredicted RBP23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 TMPRSS4Q9NRS4 437 aa23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 SCAMP3O14828 347 aaKnown RBP23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 LRCH4O75427 683 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 URI1O94763 535 aaPredicted RBP23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 DDX6P26196 483 aaKnown RBP eCLIP23.33■■□□□ 1.326e-6■■■■□ 19.3
CCDC85B-201ENST00000312579 KCNQ1P51787 676 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 SMAD4Q13485 552 aaKnown RBP23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 EIF4EBP2Q13542 120 aaPredicted RBP23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 PIGHQ14442 188 aaPredicted RBP23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 ZC3H12AQ5D1E8 599 aaKnown RBP23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 SCYL2Q6P3W7 929 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 DAAM2Q86T65 1068 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 NIPA2Q8N8Q9 360 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 LRRC57Q8N9N7 239 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 ZSCAN18Q8TBC5 510 aaPredicted RBP23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 SERPINB11Q96P15 392 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 ANLNQ9NQW6 1124 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 RRN3Q9NYV6 651 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 PCSK1NQ9UHG2 260 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 ALG6Q9Y672 507 aa23.33■■□□□ 1.32
CCDC85B-201ENST00000312579 ENDOD1O94919 500 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 COMTP21964 271 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 GBP2P32456 591 aaPredicted RBP23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 RDXP35241 583 aaKnown RBP23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 AVPR1AP37288 418 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 SSR1P43307 286 aaKnown RBP23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 TBX4P57082 545 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 SLC7A9P82251 487 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 FAM78AQ5JUQ0 283 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 CC2D1AQ6P1N0 951 aaPredicted RBP23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 STRADAQ7RTN6 431 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 ARID3BQ8IVW6 561 aaPredicted RBP23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 RIN3Q8TB24 985 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 ADAMTS19Q8TE59 1207 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 USP13Q92995 863 aaPredicted RBP23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 PEBP4Q96S96 227 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 CDH7Q9ULB5 785 aa23.32■■□□□ 1.32
CCDC85B-201ENST00000312579 MIPP30301 263 aa23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 GBP1P32455 592 aa23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 TAS2R40P59535 323 aa23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 TRIP4Q15650 581 aaPredicted RBP23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 TXNRD3NBQ6F5E7 133 aa23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 DENND4AQ7Z401 1863 aa23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 RNF34Q969K3 372 aa23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 PGAP3Q96FM1 320 aaPredicted RBP23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 FCRL2Q96LA5 508 aaPredicted RBP23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 NECTIN4Q96NY8 510 aa23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 MAGEB5Q9BZ81 275 aa23.31■■□□□ 1.32
CCDC85B-201ENST00000312579 RNF8O76064 485 aa23.3■■□□□ 1.32
CCDC85B-201ENST00000312579 FTCDO95954 541 aa23.3■■□□□ 1.32
CCDC85B-201ENST00000312579 IL1R2P27930 398 aa23.3■■□□□ 1.32
CCDC85B-201ENST00000312579 C11orf63Q6NUN7 778 aa23.3■■□□□ 1.32
CCDC85B-201ENST00000312579 CCDC185Q8N715 623 aa23.3■■□□□ 1.32
CCDC85B-201ENST00000312579 SLC39A13Q96H72 371 aa23.3■■□□□ 1.32
CCDC85B-201ENST00000312579 TLR6Q9Y2C9 796 aa23.3■■□□□ 1.32
CCDC85B-201ENST00000312579 I6L893 689 aaPredicted RBP23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 STC2O76061 302 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 MAN1A1P33908 653 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 GJC1P36383 396 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 VIPR2P41587 438 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 CXCR3P49682 368 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 LEXMQ3ZCV2 418 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 SH3RF2Q8TEC5 729 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 RSPRY1Q96DX4 576 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 TDP1Q9NUW8 608 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 GDE1Q9NZC3 331 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 CFAP97Q9P2B7 532 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 XPO7Q9UIA9 1087 aaKnown RBP23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 ARHGAP26Q9UNA1 814 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 PACSIN2Q9UNF0 486 aaPredicted RBP23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 HBS1LQ9Y450 684 aaKnown RBP23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 JRKLQ9Y4A0 524 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 DOCK8Q8NF50 2099 aa23.29■■□□□ 1.32
CCDC85B-201ENST00000312579 LEFTY2O00292 366 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 SPOPO43791 374 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 MOCS2O96007 188 aaPredicted RBP23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 F9P00740 461 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 IGLV3-27P01718 113 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 PFKLP17858 780 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 CYP4V2Q6ZWL3 525 aaPredicted RBP23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 SND1Q7KZF4 910 aaKnown RBP eCLIP23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 SLFN11Q7Z7L1 901 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 ACSF2Q96CM8 615 aaPredicted RBP23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 ASB16Q96NS5 453 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 WDCPQ9H6R7 721 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 ZWILCHQ9H900 591 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 GPATCH2LQ9NWQ4 482 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 USP18Q9UMW8 372 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 SNX10Q9Y5X0 201 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 SOBPA7XYQ1 873 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 RIOK3O14730 519 aaKnown RBP23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 KLKB1P03952 638 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 ATP1A1P05023 1023 aaKnown RBP23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 COG7P83436 770 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 SLC25A11Q02978 314 aaKnown RBP23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 ACAP1Q15027 740 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 SMTNL2Q2TAL5 461 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms