RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CCNA2P20248 432 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 JAK1P23458 1154 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 SCNN1AP37088 669 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 KDSRQ06136 332 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ZNF33AQ06730 810 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 MAPK11Q15759 364 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 SDE2Q6IQ49 451 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 DSTYKQ6XUX3 929 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 EXOC3L1Q86VI1 746 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ADCY4Q8NFM4 1077 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 KBTBD8Q8NFY9 601 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 PHF21AQ96BD5 680 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 IDI2Q9BXS1 227 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ZCCHC2Q9C0B9 1178 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 CRNNQ9UBG3 495 aaPredicted RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ZNRF3Q9ULT6 936 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 EEF2KO00418 725 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 CST8O60676 142 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 PDE5AO76074 875 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 IDO1P14902 403 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 BTBD8Q5XKL5 378 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 USP17L6PQ6QN14 398 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 SKA2Q8WVK7 121 aaPredicted RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 DCUN1D1Q96GG9 259 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 SLITRK1Q96PX8 696 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 TRIM49D1C9J1S8 452 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 PRMT5O14744 637 aaPredicted RBP9.05□□□□□ -0.96
COL6A5-202ENST00000312481 NDUFB10O96000 172 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 WDR72Q3MJ13 1102 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ATF7IP2Q5U623 682 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ACTRT2Q8TDY3 377 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 RNF145Q96MT1 663 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ECSITQ9BQ95 431 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 BCORQ6W2J9 1755 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 A0A1W2PQ67 120 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 H0YJX3 145 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 SLC16A4O15374 487 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 PRDX5P30044 214 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 SERPINH1P50454 418 aaKnown RBP9.05□□□□□ -0.96
COL6A5-202ENST00000312481 SQLEQ14534 574 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 HERC3Q15034 1050 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 KIAA1841Q6NSI8 718 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 NEK5Q6P3R8 708 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 UNC5BQ8IZJ1 945 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 FBXO25Q8TCJ0 367 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 CAMKK2Q96RR4 588 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 CAAP1Q9H8G2 361 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ERCC2P18074 760 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 PPP2R1BP30154 601 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ZDHHC20Q5W0Z9 365 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 BHLHB9Q6PI77 547 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 TXNRD3Q86VQ6 643 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ARID3BQ8IVW6 561 aaPredicted RBP9.05□□□□□ -0.96
COL6A5-202ENST00000312481 MCOLN2Q8IZK6 566 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ATP6V0D2Q8N8Y2 350 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 C15orf40Q8WUR7 153 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 FCGR1BQ92637 280 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 PACSIN1Q9BY11 444 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 RACGAP1Q9H0H5 632 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 TASP1Q9H6P5 420 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 SMURF2Q9HAU4 748 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 PKP3Q9Y446 797 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 RPS6KL1Q9Y6S9 549 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 CCDC162PA2VCL2 907 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 GK3PQ14409 553 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 CYP1B1Q16678 543 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 STRADAQ7RTN6 431 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 SLC7A14Q8TBB6 771 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ETNPPLQ8TBG4 499 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 HSFY1Q96LI6 401 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 PLGRKTQ9HBL7 147 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 EPB41L4AQ9HCS5 686 aaPredicted RBP9.05□□□□□ -0.96
COL6A5-202ENST00000312481 SPAG4Q9NPE6 437 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 HEY2Q9UBP5 337 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 LNPEPQ9UIQ6 1025 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 GSAPA4D1B5 854 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 GH1P01241 217 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 BST2Q10589 180 aaKnown RBP9.05□□□□□ -0.96
COL6A5-202ENST00000312481 HIST2H2ACQ16777 129 aaPredicted RBP9.05□□□□□ -0.96
COL6A5-202ENST00000312481 HIST2H2AA3Q6FI13 130 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 DENND1BQ6P3S1 775 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 KIAA2013Q8IYS2 634 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 CNTD1Q8N815 330 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 C1orf54Q8WWF1 131 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 SLC13A1Q9BZW2 595 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 PRDM8Q9NQV8 689 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ARHGAP20Q9P2F6 1191 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 VGLL3A8MV65 326 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 CHI3L2Q15782 390 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 TMEM44Q2T9K0 475 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 RTKNQ9BST9 563 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 AK5Q9Y6K8 562 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 PHLPP1O60346 1717 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 GUCY1B2O75343 617 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 C6orf222P0C671 652 aaPredicted RBP9.05□□□□□ -0.96
COL6A5-202ENST00000312481 HOXA10P31260 410 aaPredicted RBP9.05□□□□□ -0.96
COL6A5-202ENST00000312481 TAF6P49848 677 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms