RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 AAGABQ6PD74 315 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 C10orf107Q8IVU9 208 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 DEFB107AQ8IZN7 70 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 ARHGAP18Q8N392 663 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 PHTF2Q8N3S3 785 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 RNF149Q8NC42 400 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 EBNA1BP2Q99848 306 aaKnown RBP16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 ZDHHC7Q9NXF8 308 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 APOBEC2Q9Y235 224 aaKnown RBP16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 C2CD4BA6NLJ0 364 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 TPP1O14773 563 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 APOL1O14791 398 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 CCNT2O60583 730 aaKnown RBP16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 TNNC2P02585 160 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 ALDOAP04075 364 aaKnown RBP16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 NCF2P19878 526 aaPredicted RBP16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 CYP3A5P20815 502 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 ZNF667Q5HYK9 610 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 PPM1JQ5JR12 505 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 EEF1DP3Q658K8 133 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 NETO2Q8NC67 525 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 TEPSINQ96N21 525 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 PGLYRP2Q96PD5 576 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 OXCT2Q9BYC2 517 aaPredicted RBP16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 NIFKQ9BYG3 293 aaKnown RBP16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 NGRNQ9NPE2 291 aaKnown RBP16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 PCDHGB4Q9UN71 923 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 POMPQ9Y244 141 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 PCDHGB5Q9Y5G0 923 aa16.26■□□□□ 0.19
SLC39A1-201ENST00000310483 PSME4Q14997 1843 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 MYO18AQ92614 2054 aaKnown RBP16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 WDR27A2RRH5 827 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 PYGLP06737 847 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 NFICP08651 508 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 ITGAXP20702 1163 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 CNTN2Q02246 1040 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 CDK18Q07002 472 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 GRM1Q13255 1194 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 PDE1CQ14123 709 aaPredicted RBP16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 PCLAFQ15004 111 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 TARBP2Q15633 366 aaKnown RBP16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 MMEL1Q495T6 779 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 MAP1SQ66K74 1059 aaPredicted RBP16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 PGM2L1Q6PCE3 622 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 FRMD7Q6ZUT3 714 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 ARCQ7LC44 396 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 ADGRG6Q86SQ4 1221 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 NAT14Q8WUY8 206 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 TFB1MQ8WVM0 346 aaKnown RBP16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 KCNN1Q92952 543 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 NMD3Q96D46 503 aaKnown RBP16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 RTP4Q96DX8 246 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 ANKRD36BP1Q96IX9 119 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 CDHR1Q96JP9 859 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 SORT1Q99523 831 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 CNPY3Q9BT09 278 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 PCDH18Q9HCL0 1135 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 MAN1C1Q9NR34 630 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 ZNF358Q9NW07 568 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 CLIC5Q9NZA1 410 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 BTBD7Q9P203 1132 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 AFG3L2Q9Y4W6 797 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 PSAT1Q9Y617 370 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 PARP14Q460N5 1801 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 MAGEA3P43357 314 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 GABRB2P47870 512 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 GBE1Q04446 702 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 SLC10A2Q12908 348 aaPredicted RBP16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 CCDC14Q49A88 953 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 PDPK2PQ6A1A2 396 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 C1orf127Q8N9H9 656 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 RAB3IL1Q8TBN0 382 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 HEXIM2Q96MH2 286 aaKnown RBP16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 GCNAQ96QF7 691 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 BCO2Q9BYV7 579 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 PCDHA11Q9Y5I1 949 aa16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 SF3B1O75533 1304 aaKnown RBP eCLIP16.25■□□□□ 0.19
SLC39A1-201ENST00000310483 CAPN8A6NHC0 703 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 H3BNX3 289 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 PRKCGP05129 697 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 TFE3P19532 575 aaPredicted RBP16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 LAMTOR4Q0VGL1 99 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 LSAMPQ13449 338 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 PDK3Q15120 406 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 PDCD2Q16342 344 aaPredicted RBP16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 GRAMD1BQ3KR37 738 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 CASC4Q6P4E1 433 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 TMEM176AQ96HP8 235 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 HAPLN3Q96S86 360 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 RNPEPQ9H4A4 650 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 MFHAS1Q9Y4C4 1052 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 ANK1P16157 1881 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 ITGB3P05106 788 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 ATXN1P54253 815 aaKnown RBP16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 HMGCS2P54868 508 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 DRAXINQ8NBI3 349 aaPredicted RBP16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 ACTRT2Q8TDY3 377 aa16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 SNRNP25Q9BV90 132 aaKnown RBP16.24■□□□□ 0.19
SLC39A1-201ENST00000310483 TRIP11Q15643 1979 aa16.23■□□□□ 0.19
SLC39A1-201ENST00000310483 BCLAF3A2AJT9 711 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms