RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.03■■□□□ 1.12
ATG4D-201ENST00000309469 DTLQ9NZJ0 730 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 XPO7Q9UIA9 1087 aaKnown RBP22.03■■□□□ 1.12
ATG4D-201ENST00000309469 LRFN2Q9ULH4 789 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 MFHAS1Q9Y4C4 1052 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 SYN3O14994 580 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 TMEM63AO94886 807 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 MDH1P40925 334 aaKnown RBP22.02■■□□□ 1.12
ATG4D-201ENST00000309469 GATMP50440 423 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 GUCY1A3Q02108 690 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 SCAPQ12770 1279 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 STAT4Q14765 748 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 HP1BP3Q5SSJ5 553 aaPredicted RBP22.02■■□□□ 1.12
ATG4D-201ENST00000309469 KCNT2Q6UVM3 1135 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 ZBED8Q8IZ13 594 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 LRRN4Q8WUT4 740 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 CCDC77Q9BR77 488 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 COLEC11Q9BWP8 271 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 BRCA2P51587 3418 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 CEP350Q5VT06 3117 aa22.02■■□□□ 1.12
ATG4D-201ENST00000309469 CREB3O43889 395 aa22.02■■□□□ 1.11
ATG4D-201ENST00000309469 FNBP1LQ5T0N5 605 aa22.02■■□□□ 1.11
ATG4D-201ENST00000309469 BZW1Q7L1Q6 419 aaKnown RBP22.02■■□□□ 1.11
ATG4D-201ENST00000309469 BEND5Q7L4P6 421 aa22.02■■□□□ 1.11
ATG4D-201ENST00000309469 QKIQ96PU8 341 aaKnown RBP eCLIP22.02■■□□□ 1.11
ATG4D-201ENST00000309469 TRIM62Q9BVG3 475 aa22.02■■□□□ 1.11
ATG4D-201ENST00000309469 ANLNQ9NQW6 1124 aa22.02■■□□□ 1.11
ATG4D-201ENST00000309469 SLC12A6Q9UHW9 1150 aa22.02■■□□□ 1.11
ATG4D-201ENST00000309469 ADAM28Q9UKQ2 775 aa22.02■■□□□ 1.11
ATG4D-201ENST00000309469 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.02■■□□□ 1.11
ATG4D-201ENST00000309469 A0A087WUV0 522 aaPredicted RBP22.01■■□□□ 1.11
ATG4D-201ENST00000309469 TNFRSF10BO14763 440 aa22.01■■□□□ 1.11
ATG4D-201ENST00000309469 EIF3HO15372 352 aaKnown RBP eCLIP22.01■■□□□ 1.11
ATG4D-201ENST00000309469 DGKIO75912 1065 aa22.01■■□□□ 1.11
ATG4D-201ENST00000309469 ALDH2P05091 517 aa22.01■■□□□ 1.11
ATG4D-201ENST00000309469 SLC5A3P53794 718 aa22.01■■□□□ 1.11
ATG4D-201ENST00000309469 ARL13BQ3SXY8 428 aa22.01■■□□□ 1.11
ATG4D-201ENST00000309469 VARS2Q5ST30 1063 aaKnown RBP22.01■■□□□ 1.11
ATG4D-201ENST00000309469 OLFM3Q96PB7 478 aa22.01■■□□□ 1.11
ATG4D-201ENST00000309469 RAB6BQ9NRW1 208 aa22.01■■□□□ 1.11
ATG4D-201ENST00000309469 I6L893 689 aaPredicted RBP22■■□□□ 1.11
ATG4D-201ENST00000309469 EEF2KO00418 725 aaKnown RBP22■■□□□ 1.11
ATG4D-201ENST00000309469 CHADO15335 359 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 IVLP07476 585 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 CXCR3P49682 368 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 ATN1P54259 1190 aaPredicted RBP22■■□□□ 1.11
ATG4D-201ENST00000309469 DPYSQ14117 519 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 KCNJ11Q14654 390 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 NFE2Q16621 373 aaPredicted RBP22■■□□□ 1.11
ATG4D-201ENST00000309469 C4orf22Q6V702 233 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 RFX8Q6ZV50 586 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 CCDC13Q8IYE1 715 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 CRIPAKQ8N1N5 446 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 SCLYQ96I15 445 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 WDCPQ9H6R7 721 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 ABI2Q9NYB9 513 aaPredicted RBP22■■□□□ 1.11
ATG4D-201ENST00000309469 HACD1B0YJ81 288 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 E7ESA3 106 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 HOXA2O43364 376 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 GCATO75600 419 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 MSS51Q4VC12 460 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 FAM182AQ5T1J6 154 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 FAM171A1Q5VUB5 890 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 TAC4Q86UU9 113 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 SCN4BQ8IWT1 228 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 PDIK1LQ8N165 341 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 CCDC33Q8N5R6 958 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 BEGAINQ9BUH8 593 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 HIPK3Q9H422 1215 aa22■■□□□ 1.11
ATG4D-201ENST00000309469 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.99■■□□□ 1.11
ATG4D-201ENST00000309469 FAM72CH0Y354 149 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 BANF1O75531 89 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 AMHP03971 560 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 YWHAGP61981 247 aaKnown RBP eCLIP21.99■■□□□ 1.11
ATG4D-201ENST00000309469 SEMA3BQ13214 749 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 MRPL58Q14197 206 aaKnown RBP21.99■■□□□ 1.11
ATG4D-201ENST00000309469 PAFAH1B3Q15102 231 aaKnown RBP21.99■■□□□ 1.11
ATG4D-201ENST00000309469 FAM72AQ5TYM5 149 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 FAM72DQ6L9T8 149 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 SLC39A5Q6ZMH5 540 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 ANKRD33Q7Z3H0 272 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 FAM72BQ86X60 149 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 CEP57Q86XR8 500 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 NPAS4Q8IUM7 802 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 ANKMY2Q8IV38 441 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 CCDC110Q8TBZ0 833 aa21.99■■□□□ 1.11
ATG4D-201ENST00000309469 DQX1Q8TE96 717 aaKnown RBP21.99■■□□□ 1.11
ATG4D-201ENST00000309469 TFB1MQ8WVM0 346 aaKnown RBP21.99■■□□□ 1.11
ATG4D-201ENST00000309469 FUBP3Q96I24 572 aaKnown RBP eCLIP21.99■■□□□ 1.11
ATG4D-201ENST00000309469 CNOT10Q9H9A5 744 aaKnown RBP21.99■■□□□ 1.11
ATG4D-201ENST00000309469 ZMYND8Q9ULU4 1186 aaPredicted RBP21.99■■□□□ 1.11
ATG4D-201ENST00000309469 SF3B1O75533 1304 aaKnown RBP eCLIP21.99■■□□□ 1.113e-6■■■■■ 119.6
ATG4D-201ENST00000309469 C5orf60A6NFR6 353 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 MFSD11O43934 449 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 HCAR3P49019 387 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 SLC11A1P49279 550 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 CCL23P55773 120 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 HNRNPH2P55795 449 aaKnown RBP21.98■■□□□ 1.11
ATG4D-201ENST00000309469 IFRD2Q12894 506 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-201ENST00000309469 CTXN3Q4LDR2 81 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms